RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 EP400NLQ6ZTU2 488 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 ZBTB33Q86T24 672 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 VPS52Q8N1B4 723 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 EFHBQ8N7U6 833 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 GSTCDQ8NEC7 633 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 LEO1Q8WVC0 666 aaPredicted RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 UROC1Q96N76 676 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 ACAP3Q96P50 834 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 ZBP1Q9H171 429 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 PANK4Q9NVE7 773 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 USP25Q9UHP3 1055 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 KCNH3Q9ULD8 1083 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 PRG3Q9Y2Y8 225 aaPredicted RBP10.73□□□□□ -0.69
CLN6-209ENST00000569336 IRAK3Q9Y616 596 aa10.73□□□□□ -0.69
CLN6-209ENST00000569336 SF3B1O75533 1304 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLN6-209ENST00000569336 OBSL1O75147 1896 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 ABLIM1O14639 778 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 PTGESO14684 152 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 GCNT3O95395 438 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 SOD2P04179 222 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 CLTAP09496 248 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 CTSAP10619 480 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 CMA1P23946 247 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 NMT1P30419 496 aaKnown RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 GLUD2P49448 558 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 OSTNP61366 133 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 TFF2Q03403 129 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 PPP2R3AQ06190 1150 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 DUSP6Q16828 381 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 LEXMQ3ZCV2 418 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 SLFN12LQ6IEE8 588 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 CNNM4Q6P4Q7 775 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 ADGRD2Q7Z7M1 963 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 TMEM173Q86WV6 379 aaPredicted RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 CEP120Q8N960 986 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 CCDC34Q96HJ3 373 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 FIZ1Q96SL8 496 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 MSTO1Q9BUK6 570 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 HERC2P3Q9BVR0 1158 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 TRIM9Q9C026 710 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 IGFLR1Q9H665 355 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 MRPL17Q9NRX2 175 aaKnown RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
CLN6-209ENST00000569336 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
CLN6-209ENST00000569336 OGTO15294 1046 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 XPOTO43592 962 aaKnown RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 PPP1R37O75864 691 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 UBE4BO95155 1302 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 MYL1P05976 194 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 PFKFB1P16118 471 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 COASYQ13057 564 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 L1TD1Q5T7N2 865 aaKnown RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 KIAA1841Q6NSI8 718 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 ELMSAN1Q6PJG2 1045 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 ZNF720Q7Z2F6 126 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 RBM23Q86U06 439 aaKnown RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 MRPL43Q8N983 215 aaKnown RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 BCL7CQ8WUZ0 217 aaPredicted RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 ACCSQ96QU6 501 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 TSPAN18Q96SJ8 248 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 EMILIN2Q9BXX0 1053 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 TMEM206Q9H813 350 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 PLEKHA5Q9HAU0 1116 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 MARCH5Q9NX47 278 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 MIOSQ9NXC5 875 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 CNTN3Q9P232 1028 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
CLN6-209ENST00000569336 PCDHGC5Q9Y5F6 944 aa10.71□□□□□ -0.69
CLN6-209ENST00000569336 GREB1Q4ZG55 1949 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 A0A0B4J269 797 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 SMIM28A0A1B0GU29 152 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 A0A1W2PQ27 194 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 A0A1W2PQ64 194 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 A0A1W2PQD8 194 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 GOLGA6L4A6NEF3 574 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 C2orf71A6NGG8 1288 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 HIDE1A8MVS5 230 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 TMEM189-UBE2V1I3L0A0 370 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 EIF3DO15371 548 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLN6-209ENST00000569336 TRAPPC3O43617 180 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 TBX10O75333 385 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 TADA2AO75478 443 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 KIF4AO95239 1232 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 CXCL14O95715 111 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 ADH1AP07327 375 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 SLFN14P0C7P3 912 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 CXCL8P10145 99 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 KCNE1P15382 129 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 SYKP43405 635 aa10.7□□□□□ -0.7
CLN6-209ENST00000569336 KCNQ1P51787 676 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms