RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 LIG1P18858 919 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 RFX1P22670 979 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 NPEPPSP55786 919 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 ECM1Q16610 540 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 FMR1NBQ8N0W7 255 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 SIX5Q8N196 739 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 CNNM3Q8NE01 707 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 CMASQ8NFW8 434 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 PIGOQ8TEQ8 1089 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 STAMQ92783 540 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 UBN1Q9NPG3 1134 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 BMP2KQ9NSY1 1161 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 ANKEF1Q9NU02 776 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 PRG3Q9Y2Y8 225 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 MYH11P35749 1972 aa17.04■□□□□ 0.32
SCAMP2-210ENST00000569124 CLUHO75153 1309 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 A0A087X0B3 334 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 ARHGEF35A5YM69 484 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 E9PMD0 336 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 GLUD1P00367 558 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 ITGA4P13612 1032 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 OR1G1P47890 313 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 GLUD2P49448 558 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 AFF1P51825 1210 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 AMPD3Q01432 767 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 LAMTOR4Q0VGL1 99 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 EMC2Q15006 297 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 SKOR2Q2VWA4 1001 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 XKR9Q5GH70 373 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 TCP11Q8WWU5 503 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 PRPF31Q8WWY3 499 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 RAD54LQ92698 747 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 TMEM143Q96AN5 459 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 RPS6KC1Q96S38 1066 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 DHX33Q9H6R0 707 aaKnown RBP17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-210ENST00000569124 INPPL1O15357 1258 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 LILRB3O75022 631 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 NR1I2O75469 434 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 SLFN14P0C7P3 912 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 PLA2G4BP0C869 781 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 NPR3P17342 541 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 SNW1Q13573 536 aaKnown RBP17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 ANGPT1Q15389 498 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 E2F4Q16254 413 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 CYP26C1Q6V0L0 522 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 KRBA2Q6ZNG9 492 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 RNF149Q8NC42 400 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 TIGD1Q96MW7 591 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 TNMDQ9H2S6 317 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 MARCH5Q9NX47 278 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
SCAMP2-210ENST00000569124 CITO14578 2027 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 CCDC195A0A1B0GUA6 201 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 TEX28O15482 410 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 ASAP2O43150 1006 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 PI15O43692 258 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 NARSO43776 548 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 CFHP08603 1231 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 HOXA11P31270 313 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 MLH1P40692 756 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 RARRES1P49788 294 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 NOTUMQ6P988 496 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 KCNK18Q7Z418 384 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 COLGALT2Q8IYK4 626 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 ADSSL1Q8N142 457 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 DTWD2Q8NBA8 298 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 MTRQ99707 1265 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 WDR6Q9NNW5 1121 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 BLOC1S4Q9NUP1 217 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 IPPQ9Y573 584 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 ZNF292O60281 2723 aa17.01■□□□□ 0.31
SCAMP2-210ENST00000569124 A0A087WWV3 80 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 STK25O00506 426 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
SCAMP2-210ENST00000569124 AXLP30530 894 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 MCM6Q14566 821 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 PCBP1Q15365 356 aaKnown RBP eCLIP17■□□□□ 0.31
SCAMP2-210ENST00000569124 HACE1Q8IYU2 909 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 SYT2Q8N9I0 419 aaPredicted RBP17■□□□□ 0.31
SCAMP2-210ENST00000569124 SMG8Q8ND04 991 aaKnown RBP17■□□□□ 0.31
SCAMP2-210ENST00000569124 GPT2Q8TD30 523 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 SMG7Q92540 1137 aaKnown RBP17■□□□□ 0.31
SCAMP2-210ENST00000569124 CCDC51Q96ER9 411 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 RHOBTB2Q9BYZ6 727 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 KCND2Q9NZV8 630 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 WNT16Q9UBV4 365 aa17■□□□□ 0.31
SCAMP2-210ENST00000569124 NOTCH4Q99466 2003 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms