RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PPP3CAQ08209 521 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 MRPL49Q13405 166 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 MTMR1Q13613 665 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 FAM50AQ14320 339 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 RRP1BQ14684 758 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 CSRP2Q16527 193 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 PTPROQ16827 1216 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 MEX3CQ5U5Q3 659 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 BTNL9Q6UXG8 535 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 Q6ZVL8 140 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 NECAB2Q7Z6G3 386 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 C1orf210Q8IVY1 113 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 Q8N1X5 172 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 ANKRD35Q8N283 1001 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 MB21D1Q8N884 522 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 MDGA1Q8NFP4 955 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 IL17RAQ96F46 866 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 ZNF747Q9BV97 191 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 LSM14BQ9BX40 385 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 PUS7LQ9H0K6 701 aaKnown RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 CCDC8Q9H0W5 538 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 PCDH12Q9NPG4 1184 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 DMRT3Q9NQL9 472 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 GIT1Q9Y2X7 761 aa4.47□□□□□ -1.69
HMGB1P6-201ENST00000569046 KIAA1107Q9UPP5 1409 aa4.46□□□□□ -1.69
HMGB1P6-201ENST00000569046 LRP6O75581 1613 aa4.46□□□□□ -1.69
HMGB1P6-201ENST00000569046 NCOA2Q15596 1464 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 PLEKHH2Q8IVE3 1493 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 FYCO1Q9BQS8 1478 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 NLRP1Q9C000 1473 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 TMEM94Q12767 1356 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 MTUS2Q5JR59 1369 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 KLRG2A4D1S0 409 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 KATNA1O75449 491 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 MTHFD2P13995 350 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 GYPEP15421 78 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 HK1P19367 917 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ADSLP30566 484 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 GZMKP49863 264 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 GUCY2FP51841 1108 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 FOXE3Q13461 319 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 MST1LQ2TV78 715 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ANKS6Q68DC2 871 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 IGFL4Q6B9Z1 124 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 MFSD5Q6N075 450 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 XYLT1Q86Y38 959 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 MDM1Q8TC05 714 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ATXN2LQ8WWM7 1075 aaKnown RBP4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 PGBD4Q96DM1 585 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 BORCS6Q96GS4 357 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 MENTQ9BUN1 341 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ACE2Q9BYF1 805 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 CPEB1Q9BZB8 566 aaKnown RBP4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 GPRC5DQ9NZD1 345 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 CEP72Q9P209 647 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 TRPS1Q9UHF7 1281 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 TRHDEQ9UKU6 1024 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 COL4A3BPQ9Y5P4 624 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 CHD2O14647 1828 aaKnown RBP4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ABCC3O15438 1527 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 WASHC2AQ641Q2 1341 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 RPTORQ8N122 1335 aa4.46□□□□□ -1.7
HMGB1P6-201ENST00000569046 ERVK-7P63135 1459 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 CAMSAP2Q08AD1 1489 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 SCAF11Q99590 1463 aaKnown RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 TRIM75PA6NK02 468 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 AKR1B10O60218 316 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 MFAP3LO75121 409 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 MT-CO1P00395 513 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 AGXTP21549 392 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 APBA1Q02410 837 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 ABCB5Q2M3G0 1257 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 MIIPQ5JXC2 388 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 PRAMEF14Q5SWL7 426 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 CRIP3Q6Q6R5 217 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 HTR3DQ70Z44 454 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 NOL8Q76FK4 1167 aaKnown RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 APBB1IPQ7Z5R6 666 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 TMPRSS6Q8IU80 811 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 C1orf162Q8NEQ5 155 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 REPS2Q8NFH8 660 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 GPR156Q8NFN8 814 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 FBXO18Q8NFZ0 1043 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 HOXB13Q92826 284 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 FATE1Q969F0 183 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 CEP95Q96GE4 821 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 MNTQ99583 582 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 GPR87Q9BY21 358 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 VPS11Q9H270 941 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 ZNF277Q9NRM2 450 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 PCDHGA2Q9Y5H1 932 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 GPR45Q9Y5Y3 372 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 COL16A1Q07092 1604 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 MROH1Q8NDA8 1641 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 MAP3K1Q13233 1512 aa4.45□□□□□ -1.7
HMGB1P6-201ENST00000569046 FAM135BQ49AJ0 1406 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms