RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 BICD1Q96G01 975 aa13.56□□□□□ -0.24
RNF40-211ENST00000567365 ZMAT2Q96NC0 199 aaKnown RBP13.56□□□□□ -0.24
RNF40-211ENST00000567365 ACAP3Q96P50 834 aa13.56□□□□□ -0.24
RNF40-211ENST00000567365 GAS2L1Q99501 681 aaPredicted RBP13.56□□□□□ -0.24
RNF40-211ENST00000567365 CCDC94Q9BW85 323 aaPredicted RBP13.56□□□□□ -0.24
RNF40-211ENST00000567365 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
RNF40-211ENST00000567365 ALG13Q9NP73 1137 aaKnown RBP13.56□□□□□ -0.24
RNF40-211ENST00000567365 CNTN3Q9P232 1028 aa13.56□□□□□ -0.24
RNF40-211ENST00000567365 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
RNF40-211ENST00000567365 LZTS1Q9Y250 596 aa13.56□□□□□ -0.24
RNF40-211ENST00000567365 UBE4BO95155 1302 aa13.56□□□□□ -0.24
RNF40-211ENST00000567365 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
RNF40-211ENST00000567365 SMIM28A0A1B0GU29 152 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 CARNS1A5YM72 827 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 NRP1O14786 923 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 ZC3H11AO75152 810 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNF40-211ENST00000567365 RPN1P04843 607 aaKnown RBP13.55□□□□□ -0.24
RNF40-211ENST00000567365 CLTAP09496 248 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 TNFSF9P41273 254 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 OSTNP61366 133 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 UBE2HP62256 183 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 PSMD2Q13200 908 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 KCNB1Q14721 858 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 POSTNQ15063 836 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 ZBTB6Q15916 424 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 ENOX2Q16206 610 aaKnown RBP13.55□□□□□ -0.24
RNF40-211ENST00000567365 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 SLFN12LQ6IEE8 588 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
RNF40-211ENST00000567365 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 IGSF21Q96ID5 467 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 TMEM206Q9H813 350 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 SPG21Q9NZD8 308 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 EXOC7Q9UPT5 735 aa13.55□□□□□ -0.24
RNF40-211ENST00000567365 NT5C1B-RDH14C9J2C7 533 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 F8W810 466 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 FSCN2O14926 492 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 THP07101 528 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 CXCL8P10145 99 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 GARTP22102 1010 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 IRS1P35568 1242 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 ALDH7A1P49419 539 aaKnown RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 ERVFC1P60507 584 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 TUSC3Q13454 348 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 KYAT1Q16773 422 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 SPOUT1Q5T280 376 aaKnown RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 FBXL18Q96ME1 805 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 CBWD1Q9BRT8 395 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 MSTO1Q9BUK6 570 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 PLEKHA5Q9HAU0 1116 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
RNF40-211ENST00000567365 TOPORSQ9NS56 1045 aaPredicted RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 AGO2Q9UKV8 859 aaKnown RBP13.54□□□□□ -0.24
RNF40-211ENST00000567365 ALDH2P05091 517 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 IGFBP4P22692 258 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 IGFBP6P24592 240 aaPredicted RBP13.53□□□□□ -0.24
RNF40-211ENST00000567365 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
RNF40-211ENST00000567365 PNOCQ13519 176 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 GLRA4Q5JXX5 417 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 CD300LGQ6UXG3 332 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 C12orf56Q8IXR9 622 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 LMBRD1Q9NUN5 540 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 EXOC1Q9NV70 894 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
RNF40-211ENST00000567365 LACTBL1A8MY62 500 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 TMEM189-UBE2V1I3L0A0 370 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 LILRB3O75022 631 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
RNF40-211ENST00000567365 ACOT2P49753 483 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
RNF40-211ENST00000567365 WNT7BP56706 349 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 PTPROQ16827 1216 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
RNF40-211ENST00000567365 DDX53Q86TM3 631 aaKnown RBP13.52□□□□□ -0.25
RNF40-211ENST00000567365 PPM1EQ8WY54 764 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 POMGNT1Q8WZA1 660 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 FAM193BQ96PV7 902 aaPredicted RBP13.52□□□□□ -0.25
RNF40-211ENST00000567365 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 AGPAT3Q9NRZ7 376 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.25
RNF40-211ENST00000567365 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 KIAA0391O15091 583 aaKnown RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 EXTL3O43909 919 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 HSP90AA2PQ14568 343 aaPredicted RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 UPP1Q16831 310 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms