RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MYBP10242 640 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 SRFP11831 508 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 RPL17P18621 184 aaKnown RBP16.5■□□□□ 0.23
RNF40-209ENST00000566703 NBL1P41271 181 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 PSMD5Q16401 504 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 UVSSAQ2YD98 709 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
RNF40-209ENST00000566703 CEP57Q86XR8 500 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 GLYCTKQ8IVS8 523 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 UROC1Q96N76 676 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 CACNG4Q9UBN1 327 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 DNM3Q9UQ16 869 aa16.5■□□□□ 0.23
RNF40-209ENST00000566703 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
RNF40-209ENST00000566703 TRAPPC3O43617 180 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 POU2F2P09086 479 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 LIG1P18858 919 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 FGFR3P22607 806 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 PRPHP41219 470 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
RNF40-209ENST00000566703 PTGDRQ13258 359 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 RAB33AQ14088 237 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 LIN9Q5TKA1 542 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 SIX5Q8N196 739 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 PPP1R10Q96QC0 940 aaKnown RBP16.49■□□□□ 0.23
RNF40-209ENST00000566703 KIF2CQ99661 725 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 C17orf75Q9HAS0 396 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 DDX19AQ9NUU7 478 aaKnown RBP16.49■□□□□ 0.23
RNF40-209ENST00000566703 KCNG1Q9UIX4 513 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 GDAQ9Y2T3 454 aa16.49■□□□□ 0.23
RNF40-209ENST00000566703 PI15O43692 258 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 B3GAT3O94766 335 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 EDN1P05305 212 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 FSHRP23945 695 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 GRM5P41594 1212 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 XKR4Q5GH76 650 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 CCDC105Q8IYK2 499 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 HASPINQ8TF76 798 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 RSAD2Q8WXG1 361 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 DDX27Q96GQ7 796 aaKnown RBP16.48■□□□□ 0.23
RNF40-209ENST00000566703 NTPCRQ9BSD7 190 aaKnown RBP16.48■□□□□ 0.23
RNF40-209ENST00000566703 KIFC3Q9BVG8 833 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 TIPINQ9BVW5 301 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
RNF40-209ENST00000566703 CXCL16Q9H2A7 254 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 SLC2A4RGQ9NR83 387 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 KIF3AQ9Y496 699 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 BACE2Q9Y5Z0 518 aa16.48■□□□□ 0.23
RNF40-209ENST00000566703 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
RNF40-209ENST00000566703 XYLBO75191 536 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 C8AP07357 584 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 NPTX2P47972 431 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 YARSP54577 528 aaKnown RBP16.47■□□□□ 0.23
RNF40-209ENST00000566703 PEX3P56589 373 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 NBR1Q14596 966 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 UPP1Q16831 310 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 PHLDB3Q6NSJ2 640 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 DTWD2Q8NBA8 298 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 DRC1Q96MC2 740 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 ACO2Q99798 780 aaKnown RBP16.47■□□□□ 0.23
RNF40-209ENST00000566703 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
RNF40-209ENST00000566703 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 TOPORSQ9NS56 1045 aaPredicted RBP16.47■□□□□ 0.23
RNF40-209ENST00000566703 ARHGAP28Q9P2N2 729 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 MTRRQ9UBK8 725 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 CDH7Q9ULB5 785 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 MTCL1Q9Y4B5 1905 aaKnown RBP16.47■□□□□ 0.23
RNF40-209ENST00000566703 TRIOO75962 3097 aa16.47■□□□□ 0.23
RNF40-209ENST00000566703 PLXNA3P51805 1871 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 SMIM28A0A1B0GU29 152 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 KRBA1A5PL33 1030 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 CCDC169A6NNP5 214 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 CFHP08603 1231 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 DMP1Q13316 513 aaPredicted RBP16.46■□□□□ 0.23
RNF40-209ENST00000566703 HTR4Q13639 388 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 AXDND1Q5T1B0 1012 aaPredicted RBP16.46■□□□□ 0.23
RNF40-209ENST00000566703 RINT1Q6NUQ1 792 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 DTHD1Q6ZMT9 781 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 C1orf186Q6ZWK4 172 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 GET4Q7L5D6 327 aaPredicted RBP16.46■□□□□ 0.23
RNF40-209ENST00000566703 GRASPQ7Z6J2 395 aaPredicted RBP16.46■□□□□ 0.23
RNF40-209ENST00000566703 DAW1Q8N136 415 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 KMT5AQ9NQR1 393 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.46■□□□□ 0.23
RNF40-209ENST00000566703 SLC38A7Q9NVC3 462 aa16.46■□□□□ 0.23
RNF40-209ENST00000566703 E9PMD0 336 aa16.45■□□□□ 0.22
RNF40-209ENST00000566703 STK25O00506 426 aa16.45■□□□□ 0.22
RNF40-209ENST00000566703 ADAM12O43184 909 aa16.45■□□□□ 0.22
RNF40-209ENST00000566703 MCF2P10911 925 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms