RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 RNF180Q86T96 592 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 WDR49Q8IV35 697 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 THNSL1Q8IYQ7 743 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 ACRBPQ8NEB7 543 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 HELQQ8TDG4 1101 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 ATRIPQ8WXE1 791 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 SCLT1Q96NL6 688 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 FNBP1Q96RU3 617 aa17.12■□□□□ 0.33
VAC14-208ENST00000566655 CENPFP49454 3210 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 SSU72P8A0A1W2PR75 194 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 EIF3CLB5ME19 914 aaKnown RBP17.11■□□□□ 0.33
VAC14-208ENST00000566655 B4GALT4O60513 344 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 CABYRO75952 493 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 STAG3L1P0CL83 205 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 RFX1P22670 979 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 EIF4A3P38919 411 aaKnown RBP17.11■□□□□ 0.33
VAC14-208ENST00000566655 PRKCIP41743 596 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 MGAT3Q09327 533 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 RAPGEF1Q13905 1077 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 DRAP1Q14919 205 aaPredicted RBP17.11■□□□□ 0.33
VAC14-208ENST00000566655 EFCAB13Q8IY85 973 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 SLC43A3Q8NBI5 491 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 KAT5Q92993 513 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 KREMEN1Q96MU8 473 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 EIF3CQ99613 913 aaKnown RBP17.11■□□□□ 0.33
VAC14-208ENST00000566655 TSEN34Q9BSV6 310 aaKnown RBP17.11■□□□□ 0.33
VAC14-208ENST00000566655 CELF4Q9BZC1 486 aaKnown RBP17.11■□□□□ 0.33
VAC14-208ENST00000566655 PTPN22Q9Y2R2 807 aa17.11■□□□□ 0.33
VAC14-208ENST00000566655 MOXD2PA6NHM9 499 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 ZSCAN12O43309 604 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 ZC3H11AO75152 810 aaKnown RBP eCLIP17.1■□□□□ 0.33
VAC14-208ENST00000566655 ERLIN2O94905 339 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 HLA-DRAP01903 254 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 CLTAP09496 248 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 PNMA6AP0CW24 399 aaPredicted RBP17.1■□□□□ 0.33
VAC14-208ENST00000566655 TNNI1P19237 187 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 SOX5P35711 763 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 AP3M2P53677 418 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 MRPS6P82932 125 aaKnown RBP17.1■□□□□ 0.33
VAC14-208ENST00000566655 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
VAC14-208ENST00000566655 ITGA7Q13683 1181 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 SURF1Q15526 300 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 ASIC2Q16515 512 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 CATSPER4Q7RTX7 472 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 SYT11Q9BT88 431 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 GINS2Q9Y248 185 aa17.1■□□□□ 0.33
VAC14-208ENST00000566655 CCP110O43303 1012 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 CCDC175P0C221 793 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 CXCL8P10145 99 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 GRM5P41594 1212 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 STAT1P42224 750 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 ARHGAP25P42331 645 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 OSTNP61366 133 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 KYAT1Q16773 422 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 TMEM132AQ24JP5 1023 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 TRIM71Q2Q1W2 868 aaKnown RBP17.09■□□□□ 0.33
VAC14-208ENST00000566655 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
VAC14-208ENST00000566655 TATDN2Q93075 761 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 ELMO3Q96BJ8 720 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
VAC14-208ENST00000566655 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
VAC14-208ENST00000566655 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
VAC14-208ENST00000566655 APOBEC3GQ9HC16 384 aaKnown RBP17.09■□□□□ 0.33
VAC14-208ENST00000566655 UBE2TQ9NPD8 197 aaPredicted RBP17.09■□□□□ 0.33
VAC14-208ENST00000566655 FOXN3O00409 490 aaPredicted RBP17.08■□□□□ 0.32
VAC14-208ENST00000566655 IL18RAPO95256 599 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 CHRNA1P02708 482 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 AXLP30530 894 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 CYLC1P35663 651 aaPredicted RBP17.08■□□□□ 0.32
VAC14-208ENST00000566655 C1QTNF8P60827 252 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 DCAF4L1Q3SXM0 396 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 ZNF571Q7Z3V5 609 aaPredicted RBP17.08■□□□□ 0.32
VAC14-208ENST00000566655 FAM228AQ86W67 206 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 VTI1AQ96AJ9 217 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 CCDC42Q96M95 316 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 PI4K2AQ9BTU6 479 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
VAC14-208ENST00000566655 HAUS4Q9H6D7 363 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 RPF1Q9H9Y2 349 aaKnown RBP17.08■□□□□ 0.32
VAC14-208ENST00000566655 NENFQ9UMX5 172 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 NOC2LQ9Y3T9 749 aaKnown RBP17.08■□□□□ 0.32
VAC14-208ENST00000566655 TRPV2Q9Y5S1 764 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 CDY2AQ9Y6F7 541 aa17.08■□□□□ 0.32
VAC14-208ENST00000566655 EVPLQ92817 2033 aa17.07■□□□□ 0.32
VAC14-208ENST00000566655 LACTBL1A8MY62 500 aa17.07■□□□□ 0.32
VAC14-208ENST00000566655 OFD1O75665 1012 aa17.07■□□□□ 0.32
VAC14-208ENST00000566655 GFPT2O94808 682 aa17.07■□□□□ 0.32
VAC14-208ENST00000566655 NPTXRO95502 500 aa17.07■□□□□ 0.32
VAC14-208ENST00000566655 ABL1P00519 1130 aa17.07■□□□□ 0.32
VAC14-208ENST00000566655 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
VAC14-208ENST00000566655 MYCNP04198 464 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms