RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CLIC2O15247 247 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 FAM189A1O60320 539 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 LETM1O95202 739 aaPredicted RBP12.5□□□□□ -0.41
KARS-207ENST00000566560 EOMESO95936 686 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 NR3C1P04150 777 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 AKAP5P24588 427 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 CCNE1P24864 410 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 MLH1P40692 756 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
KARS-207ENST00000566560 FAM189BP81408 668 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 LRRC63Q05C16 580 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 TYRO3Q06418 890 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 KYAT1Q16773 422 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 ZSCAN23Q3MJ62 389 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 SEZ6Q53EL9 994 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 ZBTB41Q5SVQ8 909 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 GLB1LQ6UWU2 654 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 MRPL10Q7Z7H8 261 aaKnown RBP12.5□□□□□ -0.41
KARS-207ENST00000566560 HERC6Q8IVU3 1022 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 C12orf56Q8IXR9 622 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 ABI1Q8IZP0 508 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 GPD1LQ8N335 351 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 YME1L1Q96TA2 773 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 PCIF1Q9H4Z3 704 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
KARS-207ENST00000566560 ANO10Q9NW15 660 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 PARP2Q9UGN5 583 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 TRAF3IP3Q9Y228 551 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 GOLGA8IPA6NC78 632 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 GOLGA8JA6NMD2 632 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 EXTL3O43909 919 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 EXOC3O60645 756 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 GJB5O95377 273 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 LDHAP00338 332 aaKnown RBP12.49□□□□□ -0.41
KARS-207ENST00000566560 CLTAP09496 248 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 CXCL8P10145 99 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 NR2F2P24468 414 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 TNFSF9P41273 254 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 ACOT2P49753 483 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 GATMP50440 423 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 PMS1P54277 932 aaKnown RBP12.49□□□□□ -0.41
KARS-207ENST00000566560 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
KARS-207ENST00000566560 EDRF1Q3B7T1 1238 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 CLLU1OSQ5K130 101 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 CRIPAKQ8N1N5 446 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 XXYLT1Q8NBI6 393 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 HELQQ8TDG4 1101 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 SNX27Q96L92 541 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 ACAP3Q96P50 834 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 FAM213AQ9BRX8 229 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 RNF19AQ9NV58 838 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 KLK14Q9P0G3 267 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 CPSF3Q9UKF6 684 aaKnown RBP12.49□□□□□ -0.41
KARS-207ENST00000566560 GIT1Q9Y2X7 761 aa12.49□□□□□ -0.41
KARS-207ENST00000566560 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 TLL1O43897 1013 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 DGKIO75912 1065 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 CCDC192P0DO97 292 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 RPL13P26373 211 aaKnown RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 STX17P56962 302 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 ENOX2Q16206 610 aaKnown RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 NFIL3Q16649 462 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 PAN2Q504Q3 1202 aaKnown RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 CEP135Q66GS9 1140 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 FAM109BQ6ICB4 259 aaPredicted RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 TTI2Q6NXR4 508 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 CBWD2Q8IUF1 395 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 SLC9A9Q8IVB4 645 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 BRSK2Q8IWQ3 736 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 LRRC43Q8N309 656 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 TTC13Q8NBP0 860 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 ZSWIM2Q8NEG5 633 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 URGCPQ8TCY9 931 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 ZFP42Q96MM3 310 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 GAD1Q99259 594 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 MRPL9Q9BYD2 267 aaKnown RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 TMEM117Q9H0C3 514 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 RC3H2Q9HBD1 1191 aaKnown RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 RBAKQ9NYW8 714 aaPredicted RBP12.48□□□□□ -0.41
KARS-207ENST00000566560 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
KARS-207ENST00000566560 A0A1W2PPC1 479 aa12.47□□□□□ -0.41
KARS-207ENST00000566560 ARL5CA6NH57 179 aa12.47□□□□□ -0.41
KARS-207ENST00000566560 TBKBP1A7MCY6 615 aa12.47□□□□□ -0.41
KARS-207ENST00000566560 GRXCR1A8MXD5 290 aa12.47□□□□□ -0.41
KARS-207ENST00000566560 ADRB2P07550 413 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms