RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NME9Q86XW9 330 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 RHOT1Q8IXI2 618 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CHCHD4Q8N4Q1 142 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 RNF152Q8N8N0 203 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 BRI3BPQ8WY22 251 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 RRP36Q96EU6 259 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 HEPHQ9BQS7 1158 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PYM1Q9BRP8 204 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 STK31Q9BXU1 1019 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 STK33Q9BYT3 514 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 PARD6AQ9NPB6 346 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CD320Q9NPF0 282 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 CNNM1Q9NRU3 951 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 KRT84Q9NSB2 600 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SACM1LQ9NTJ5 587 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 ZSWIM5Q9P217 1185 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 KIF17Q9P2E2 1029 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 ARHGAP28Q9P2N2 729 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 GPR34Q9UPC5 381 aa3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 SMG5Q9UPR3 1016 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-211ENST00000566550 A0A1W2PPC4 97 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 A0A1W2PPH5 198 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 GOLGA6L3A6NEY3 463 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 SYT5O00445 386 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 KRIT1O00522 736 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 TOR1BO14657 336 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC27A2O14975 620 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 NPC1O15118 1278 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 ARHGAP6O43182 974 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 FRS3O43559 492 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 FOXD2O60548 495 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 PLA2G6O60733 806 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 ZBED4O75132 1171 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 FUCA1P04066 466 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 MED14OSP0DP75 135 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 GSPT1P15170 499 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 NPR1P16066 1061 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 PTPN1P18031 435 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 RPL17P18621 184 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 FGFR2P21802 821 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 XPAP23025 273 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 RPS6KB1P23443 525 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 HOXD12P35452 270 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 GDNFP39905 211 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 FNTBP49356 437 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 NAP1L1P55209 391 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 DSC2Q02487 901 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 TNK2Q07912 1038 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 PLS1Q14651 629 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 DLGAP5Q15398 846 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 ADRM1Q16186 407 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 MUM1L1Q5H9M0 696 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 RRAGBQ5VZM2 374 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 BTBD8Q5XKL5 378 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 LMBRD2Q68DH5 695 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 UNQ6494/PRO21346Q6UXR6 183 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 KCTD1Q719H9 257 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 HEATR3Q7Z4Q2 680 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 NLGN4XQ8N0W4 816 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 TCP11L2Q8N4U5 519 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 USHBP1Q8N6Y0 703 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 LSMEM1Q8N8F7 131 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 ANKRD52Q8NB46 1076 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 STYXQ8WUJ0 223 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 CENPIQ92674 756 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 HTRA1Q92743 480 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 HVCN1Q96D96 273 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 IQCDQ96DY2 449 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 LRRC46Q96FV0 321 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 MAELQ96JY0 434 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 TIGD1Q96MW7 591 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 TTC14Q96N46 770 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 SENP6Q9GZR1 1112 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 ABCF2Q9UG63 623 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 MAN2B2Q9Y2E5 1009 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 TMEM98Q9Y2Y6 226 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 RWDD3Q9Y3V2 267 aa3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 CFAP20Q9Y6A4 193 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM170AA1A519 330 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 HMX3A6NHT5 357 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM90A27PA6NNH2 459 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 WASH4PA8MWX3 477 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 DHX16O60231 1041 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 KRT1P04264 644 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 RPLP2P05387 115 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 SLC3A2P08195 630 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 CELA3BP08861 270 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 GLULP15104 373 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 AKR1B1P15121 316 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 CTSSP25774 331 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 POLD1P28340 1107 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 LTKP29376 864 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 OAS2P29728 719 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 GALNSP34059 522 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 SERPINF1P36955 418 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 KIR3DL1P43629 444 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 NPTX2P47972 431 aa3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 CLNS1AP54105 237 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-211ENST00000566550 ATXN1P54253 815 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms