RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 ADPGKQ9BRR6 497 aa16.36■□□□□ 0.21
IFT140-207ENST00000566052 CXCL16Q9H2A7 254 aa16.36■□□□□ 0.21
IFT140-207ENST00000566052 MYH15Q9Y2K3 1946 aa16.36■□□□□ 0.21
IFT140-207ENST00000566052 NOTCH4Q99466 2003 aa16.36■□□□□ 0.21
IFT140-207ENST00000566052 KRBA1A5PL33 1030 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 CASTOR2A6NHX0 329 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 HOXA9P31269 272 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 PDIA5Q14554 519 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 PSMD5Q16401 504 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 DCAF4L1Q3SXM0 396 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 EEF1DP3Q658K8 133 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 HAUS3Q68CZ6 603 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 DTWD2Q8NBA8 298 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 DEPTORQ8TB45 409 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 KIFAP3Q92845 792 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 SLC2A4RGQ9NR83 387 aa16.35■□□□□ 0.21
IFT140-207ENST00000566052 TMEM189-UBE2V1I3L0A0 370 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 SEC24BO95487 1268 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 CFHP08603 1231 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 POU2F2P09086 479 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 ECM1Q16610 540 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 TTC38Q5R3I4 469 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.34■□□□□ 0.21
IFT140-207ENST00000566052 RTL10Q7L3V2 364 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 FRMD5Q7Z6J6 570 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 HASPINQ8TF76 798 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 IFT74Q96LB3 600 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 PPP1R10Q96QC0 940 aaKnown RBP16.34■□□□□ 0.21
IFT140-207ENST00000566052 USP20Q9Y2K6 914 aa16.34■□□□□ 0.21
IFT140-207ENST00000566052 FGFR3P22607 806 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 FSHRP23945 695 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 CCT6AP40227 531 aaKnown RBP16.33■□□□□ 0.2
IFT140-207ENST00000566052 HMGN5P82970 282 aaKnown RBP16.33■□□□□ 0.2
IFT140-207ENST00000566052 RAB33AQ14088 237 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 ANGPT1Q15389 498 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 TMEM132AQ24JP5 1023 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 UVSSAQ2YD98 709 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 NT5DC1Q5TFE4 455 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 LIN9Q5TKA1 542 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 DCLRE1AQ6PJP8 1040 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 GET4Q7L5D6 327 aaPredicted RBP16.33■□□□□ 0.2
IFT140-207ENST00000566052 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
IFT140-207ENST00000566052 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 STK24Q9Y6E0 443 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 CITO14578 2027 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.2
IFT140-207ENST00000566052 ADAM12O43184 909 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 C8AP07357 584 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 U2AF2P26368 475 aaKnown RBP eCLIP16.32■□□□□ 0.26e-7■■■■□ 26.4
IFT140-207ENST00000566052 EP300Q09472 2414 aaPredicted RBP16.32■□□□□ 0.2
IFT140-207ENST00000566052 UPP1Q16831 310 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 XKR4Q5GH76 650 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 PPM1LQ5SGD2 360 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 ATF7IP2Q5U623 682 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 CD300LGQ6UXG3 332 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 APBB1IPQ7Z5R6 666 aaPredicted RBP16.32■□□□□ 0.2
IFT140-207ENST00000566052 GRASPQ7Z6J2 395 aaPredicted RBP16.32■□□□□ 0.2
IFT140-207ENST00000566052 GPR152Q8TDT2 470 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 ZSCAN31Q96LW9 406 aaPredicted RBP16.32■□□□□ 0.2
IFT140-207ENST00000566052 UROC1Q96N76 676 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 TBC1D17Q9HA65 648 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 CDH7Q9ULB5 785 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 TNFSF13BQ9Y275 285 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 GDAQ9Y2T3 454 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 NUMBLQ9Y6R0 609 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 DCHS1Q96JQ0 3298 aa16.32■□□□□ 0.2
IFT140-207ENST00000566052 K7ERI5 159 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 LIG1P18858 919 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 ALKAL1Q6UXT8 129 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 PTPRHQ9HD43 1115 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 ARHGEF3Q9NR81 526 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
IFT140-207ENST00000566052 DLGAP2Q9P1A6 1054 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 CA14Q9ULX7 337 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 NOL7Q9UMY1 257 aaKnown RBP16.31■□□□□ 0.2
IFT140-207ENST00000566052 BACE2Q9Y5Z0 518 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
IFT140-207ENST00000566052 DMXL1Q9Y485 3027 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 CACNA1IQ9P0X4 2223 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 PHLPP2Q6ZVD8 1323 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 MYH11P35749 1972 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 XYLBO75191 536 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
IFT140-207ENST00000566052 OR1D2P34982 312 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 GRM5P41594 1212 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
IFT140-207ENST00000566052 CLCNKBP51801 687 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 AXDND1Q5T1B0 1012 aaPredicted RBP16.3■□□□□ 0.2
IFT140-207ENST00000566052 DAW1Q8N136 415 aa16.3■□□□□ 0.2
IFT140-207ENST00000566052 FGF13Q92913 245 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms