RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SMIM28A0A1B0GU29 152 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 PER2O15055 1255 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 SOD2P04179 222 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 CLTAP09496 248 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 KCNE1P15382 129 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 MATR3P43243 847 aaKnown RBP eCLIP16.86■□□□□ 0.29
COMMD4-212ENST00000565517 ALCAMQ13740 583 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 KCNC3Q14003 757 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 HSP90AA2PQ14568 343 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-212ENST00000565517 ZC2HC1CQ53FD0 456 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-212ENST00000565517 TMEM184AQ6ZMB5 413 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 STAMQ92783 540 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 SNX27Q96L92 541 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 HAPLN2Q9GZV7 340 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 PLEKHA5Q9HAU0 1116 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 SSX2IPQ9Y2D8 614 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 STYXL1Q9Y6J8 313 aa16.86■□□□□ 0.29
COMMD4-212ENST00000565517 A0A0B4J269 797 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 OGTO15294 1046 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 LINC01565O15544 149 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 HARSP12081 509 aaKnown RBP16.85■□□□□ 0.29
COMMD4-212ENST00000565517 KCNQ1P51787 676 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 OSTNP61366 133 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 SLC10A6Q3KNW5 377 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 SLFN12LQ6IEE8 588 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 EP400NLQ6ZTU2 488 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 GPR65Q8IYL9 337 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-212ENST00000565517 CHAMP1Q96JM3 812 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 UROC1Q96N76 676 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 HERC2P3Q9BVR0 1158 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 SLC38A7Q9NVC3 462 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 USP25Q9UHP3 1055 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 ADAM28Q9UKQ2 775 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 EXOC7Q9UPT5 735 aa16.85■□□□□ 0.29
COMMD4-212ENST00000565517 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 A0A1W2PQ27 194 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 A0A1W2PQ64 194 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 A0A1W2PQD8 194 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 FAM189A1O60320 539 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 LILRB3O75022 631 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 TBX10O75333 385 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 TADA2AO75478 443 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 GLP2RO95838 553 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 SLFN14P0C7P3 912 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 NDUFV1P49821 464 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 DLX2Q07687 328 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-212ENST00000565517 COASYQ13057 564 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 L1TD1Q5T7N2 865 aaKnown RBP16.84■□□□□ 0.29
COMMD4-212ENST00000565517 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 SLC39A4Q6P5W5 647 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 DDX27Q96GQ7 796 aaKnown RBP16.84■□□□□ 0.29
COMMD4-212ENST00000565517 MSLNLQ96KJ4 702 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 ACCSQ96QU6 501 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 TSPAN18Q96SJ8 248 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 PAAF1Q9BRP4 392 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 COL25A1Q9BXS0 654 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-212ENST00000565517 MRPL17Q9NRX2 175 aaKnown RBP16.84■□□□□ 0.29
COMMD4-212ENST00000565517 CHST7Q9NS84 486 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 HPSEQ9Y251 543 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-212ENST00000565517 ANK1P16157 1881 aa16.84■□□□□ 0.29
COMMD4-212ENST00000565517 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-212ENST00000565517 TTC26A0AVF1 554 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 CASTOR2A6NHX0 329 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 ANKRD63C9JTQ0 380 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 H3BQ06 376 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-212ENST00000565517 TMEM189-UBE2V1I3L0A0 370 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 MEFVO15553 781 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-212ENST00000565517 CLASP2O75122 1294 aaKnown RBP16.83■□□□□ 0.28
COMMD4-212ENST00000565517 GCNT3O95395 438 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 ADRB2P07550 413 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 SRGAP2BP0DMP2 458 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 PFKFB1P16118 471 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 ASIC1P78348 528 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 POU5F1Q01860 360 aaKnown RBP16.83■□□□□ 0.28
COMMD4-212ENST00000565517 POSTNQ15063 836 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 GLRA4Q5JXX5 417 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 KIAA0319Q5VV43 1072 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 DCLRE1AQ6PJP8 1040 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 STXBP4Q6ZWJ1 553 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 TAS1R1Q7RTX1 841 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 CEP57L1Q8IYX8 460 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.28
COMMD4-212ENST00000565517 MSTO1Q9BUK6 570 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 GPR62Q9BZJ7 368 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 TBC1D7Q9P0N9 293 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 CLEC1BQ9P126 229 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 FAM50BQ9Y247 325 aa16.83■□□□□ 0.28
COMMD4-212ENST00000565517 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 SF3B1O75533 1304 aaKnown RBP eCLIP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 A0A1B0GVL5 298 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 GRXCR2A6NFK2 248 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 F8W810 466 aa16.82■□□□□ 0.28
COMMD4-212ENST00000565517 ACTN4O43707 911 aaKnown RBP16.82■□□□□ 0.28
COMMD4-212ENST00000565517 URODP06132 367 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms