RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ABLIM1O14639 778 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 HOXA2O43364 376 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 NPTXRO95502 500 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 IL9P15248 144 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 HOXD13P35453 343 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 MATR3P43243 847 aaKnown RBP eCLIP28.29■■■□□ 2.12
NME3-208ENST00000565379 COL19A1Q14993 1142 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 CLLU1OSQ5K130 101 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 SPOUT1Q5T280 376 aaKnown RBP28.29■■■□□ 2.12
NME3-208ENST00000565379 EEF1DP3Q658K8 133 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 NELFCDQ8IXH7 590 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 P2RX5Q93086 422 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 CASD1Q96PB1 797 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 LRFN3Q9BTN0 628 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 CDT1Q9H211 546 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 CD320Q9NPF0 282 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 CLDND1Q9NY35 253 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 ANKFY1Q9P2R3 1169 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 USP20Q9Y2K6 914 aa28.29■■■□□ 2.12
NME3-208ENST00000565379 C5orf42Q9H799 3197 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 A0A0B4J269 797 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 BIN1O00499 593 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 PSMA7O14818 248 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 LINC01565O15544 149 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 LTBRP36941 435 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 PBX3P40426 434 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 PRCPP42785 496 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 DLX2Q07687 328 aaPredicted RBP28.28■■■□□ 2.12
NME3-208ENST00000565379 TMEM31Q5JXX7 168 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 C12orf56Q8IXR9 622 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 ADSSL1Q8N142 457 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 MLKLQ8NB16 471 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 TMEM174Q8WUU8 243 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 POF1BQ8WVV4 589 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 POMGNT1Q8WZA1 660 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 PABPC5Q96DU9 382 aaKnown RBP28.28■■■□□ 2.12
NME3-208ENST00000565379 DHTKD1Q96HY7 919 aaPredicted RBP28.28■■■□□ 2.12
NME3-208ENST00000565379 EIF2AQ9BY44 585 aaKnown RBP28.28■■■□□ 2.12
NME3-208ENST00000565379 IGFLR1Q9H665 355 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 IPPQ9Y573 584 aa28.28■■■□□ 2.12
NME3-208ENST00000565379 ZMYM2Q9UBW7 1377 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 ANKRD63C9JTQ0 380 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 CALUO43852 315 aaPredicted RBP28.27■■■□□ 2.12
NME3-208ENST00000565379 LDHAP00338 332 aaKnown RBP28.27■■■□□ 2.12
NME3-208ENST00000565379 POU5F1Q01860 360 aaKnown RBP28.27■■■□□ 2.12
NME3-208ENST00000565379 PUS10Q3MIT2 529 aaKnown RBP28.27■■■□□ 2.12
NME3-208ENST00000565379 SLC39A4Q6P5W5 647 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 SASS6Q6UVJ0 657 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 ZNF598Q86UK7 904 aaKnown RBP28.27■■■□□ 2.12
NME3-208ENST00000565379 CDR2LQ86X02 465 aaPredicted RBP28.27■■■□□ 2.12
NME3-208ENST00000565379 COLGALT1Q8NBJ5 622 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 KCTD10Q9H3F6 313 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 DACH1Q9UI36 760 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 TRAF3IP3Q9Y228 551 aa28.27■■■□□ 2.12
NME3-208ENST00000565379 TGFB1I1O43294 461 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 ITGA4P13612 1032 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 BMP6P22004 513 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 GRM5P41594 1212 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 MYBPC2Q14324 1141 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 CLUL1Q15846 466 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 CT47A1Q5JQC4 288 aaPredicted RBP28.26■■■□□ 2.11
NME3-208ENST00000565379 ISM2Q6H9L7 571 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 PTCRAQ6ISU1 281 aaPredicted RBP28.26■■■□□ 2.11
NME3-208ENST00000565379 ARMCX5Q6P1M9 558 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 ZBTB33Q86T24 672 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 SMYD4Q8IYR2 804 aaPredicted RBP28.26■■■□□ 2.11
NME3-208ENST00000565379 SMG8Q8ND04 991 aaKnown RBP28.26■■■□□ 2.11
NME3-208ENST00000565379 KHSRPQ92945 711 aaKnown RBP eCLIP28.26■■■□□ 2.11
NME3-208ENST00000565379 ZBTB45Q96K62 511 aaPredicted RBP28.26■■■□□ 2.11
NME3-208ENST00000565379 MSTO1Q9BUK6 570 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 CCDC94Q9BW85 323 aaPredicted RBP28.26■■■□□ 2.11
NME3-208ENST00000565379 TMEM117Q9H0C3 514 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 AGPAT3Q9NRZ7 376 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 MAPK8IP1Q9UQF2 711 aa28.26■■■□□ 2.11
NME3-208ENST00000565379 PI4K2BG5E9Z4 385 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 OGTO15294 1046 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 GPR37L1O60883 481 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 PLA2G5P39877 138 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 NLRP12P59046 1061 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 NFIL3Q16649 462 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 FOXR2Q6PJQ5 311 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 HELQQ8TDG4 1101 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 LPPQ93052 612 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 FAM122AQ96E09 287 aa28.25■■■□□ 2.11
NME3-208ENST00000565379 AGO2Q9UKV8 859 aaKnown RBP28.25■■■□□ 2.11
NME3-208ENST00000565379 GRXCR2A6NFK2 248 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 MEIS3P2A8K0S8 358 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 TBX10O75333 385 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 ADSSP30520 456 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 CTC1Q2NKJ3 1217 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 CENPPQ6IPU0 288 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 GJD3Q8N144 294 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 TSG101Q99816 390 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 KIAA1586Q9HCI6 787 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 GIT1Q9Y2X7 761 aa28.24■■■□□ 2.11
NME3-208ENST00000565379 ARIH1Q9Y4X5 557 aaPredicted RBP28.24■■■□□ 2.11
NME3-208ENST00000565379 BICDL2A1A5D9 508 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 FGF18O76093 207 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 CLTAP09496 248 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 RPL13P26373 211 aaKnown RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms