RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 TMEM139Q8IV31 216 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 NOSTRINQ8IVI9 506 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 DNAJC10Q8IXB1 793 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 AADATQ8N5Z0 425 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 LSMEM1Q8N8F7 131 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ENAHQ8N8S7 591 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 GBP7Q8N8V2 638 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 NEK11Q8NG66 645 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 FNIP1Q8TF40 1166 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 EXOC4Q96A65 974 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 FAM89AQ96GI7 184 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 EPSTI1Q96J88 318 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 NAP1L3Q99457 506 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 KATNAL1Q9BW62 490 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 BRD8Q9H0E9 1235 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 RNF41Q9H4P4 317 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 VCPKMTQ9H867 229 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ELP3Q9H9T3 547 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 STARD7Q9NQZ5 370 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 GTF2IRD1Q9UHL9 959 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TRAF3IP3Q9Y228 551 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 WDR37Q9Y2I8 494 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TRIM17Q9Y577 477 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 SRPRBQ9Y5M8 271 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 MRFAP1Q9Y605 127 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TIAM2Q8IVF5 1701 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 SHANK3Q9BYB0 1731 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ZNF804BA4D1E1 1349 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 PDS5AQ29RF7 1337 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 UBN2Q6ZU65 1347 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ZNF532Q9HCE3 1301 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 FAM221AA4D161 298 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CCDC151A5D8V7 595 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 GSG1L2A8MUP6 293 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 FANCGO15287 622 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 NCAM2O15394 837 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 STX10O60499 249 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 URI1O94763 535 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SEC31AO94979 1220 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 DEXIO95424 95 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 MMP1P03956 469 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 POLR3DP05423 398 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 DESP17661 470 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CAPN3P20807 821 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 RPL13P26373 211 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 TMOD1P28289 359 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CTNNA1P35221 906 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 MAN2A2P49641 1150 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 RENBPP51606 427 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CLCN2P51788 898 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CDR1P51861 262 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 PLIN5Q00G26 463 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 GUCY1B3Q02153 619 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SSRP1Q08945 709 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 TUBB2AQ13885 445 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ARSHQ5FYA8 562 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SH2D4BQ5SQS7 431 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 NUGGCQ68CJ6 796 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 HGSNATQ68CP4 663 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 OTUD7BQ6GQQ9 843 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CRTC1Q6UUV9 634 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 BTN2A1Q7KYR7 527 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 EEPD1Q7L9B9 569 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CHST3Q7LGC8 479 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 DGLUCYQ7Z3D6 616 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ZNF438Q7Z4V0 828 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ZNF804AQ7Z570 1209 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SDCCAG8Q86SQ7 713 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 NLRP14Q86W24 1093 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 FOXP4Q8IVH2 680 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 RNF168Q8IYW5 571 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CRACR2BQ8N4Y2 399 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 NAT8LQ8N9F0 302 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SMYD1Q8NB12 490 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SPATA5Q8NB90 893 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 MGARPQ8TDB4 240 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 DDX17Q92841 729 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SMARCE1Q969G3 411 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 EIF2AK1Q9BQI3 630 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 TUBB2BQ9BVA1 445 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 HERC2P3Q9BVR0 1158 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 NACAP1Q9BZK3 213 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ADAM19Q9H013 955 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 RNF208Q9H0X6 261 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 MMADHCQ9H3L0 296 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 GREM2Q9H772 168 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SYNCQ9H7C4 482 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ALG13Q9NP73 1137 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 PAPOLBQ9NRJ5 636 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 BLOC1S4Q9NUP1 217 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SPATS2LQ9NUQ6 558 aaKnown RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 RNF19AQ9NV58 838 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 SIRT5Q9NXA8 310 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CXXC1Q9P0U4 656 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-214ENST00000565274 ZSWIM5Q9P217 1185 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 GIMAP2Q9UG22 337 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 KCNH3Q9ULD8 1083 aa5.58□□□□□ -1.52
CAPN3-214ENST00000565274 CCPG1Q9ULG6 757 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms