RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 FSD1Q9BTV5 496 aa6.01□□□□□ -1.45
TUBGCP4-209ENST00000564511 LRRCC1Q9C099 1032 aa6.01□□□□□ -1.45
TUBGCP4-209ENST00000564511 C12orf49Q9H741 205 aa6.01□□□□□ -1.45
TUBGCP4-209ENST00000564511 TOMM22Q9NS69 142 aa6.01□□□□□ -1.45
TUBGCP4-209ENST00000564511 CLEC1BQ9P126 229 aa6.01□□□□□ -1.45
TUBGCP4-209ENST00000564511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.01□□□□□ -1.45
TUBGCP4-209ENST00000564511 C17orf102A2RUQ5 167 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PRR23AA6NEV1 266 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PROB1E7EW31 1015 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PDGFBP01127 241 aaPredicted RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 TOP1P11387 765 aaKnown RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 NRIP1P48552 1158 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 CAMK1Q14012 370 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 BTG3Q14201 252 aaPredicted RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 CBX2Q14781 532 aaPredicted RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 HSDL1Q3SXM5 330 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 RRP12Q5JTH9 1297 aaKnown RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 ARHGEF16Q5VV41 709 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 TSHZ3Q63HK5 1081 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PCNX4Q63HM2 1172 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 SCARA3Q6AZY7 606 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 RBM23Q86U06 439 aaKnown RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 SPACA3Q8IXA5 215 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 SMRP1Q8NCR6 262 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PPTC7Q8NI37 304 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 SYTL5Q8TDW5 730 aaPredicted RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 APBB2Q92870 758 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 GPATCH3Q96I76 525 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PHF7Q9BWX1 381 aaPredicted RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 RNPEPQ9H4A4 650 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 PRDM7Q9NQW5 492 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 RWDD3Q9Y3V2 267 aa6□□□□□ -1.45
TUBGCP4-209ENST00000564511 USP15Q9Y4E8 981 aaPredicted RBP6□□□□□ -1.45
TUBGCP4-209ENST00000564511 ADGRA3Q8IWK6 1321 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 WDR19Q8NEZ3 1342 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 LCTP09848 1927 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 GVINP1Q7Z2Y8 2422 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 DNAH14Q0VDD8 3507 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 GGPS1O95749 300 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 MMP1P03956 469 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 USP17L7P0C7H9 530 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 LINC00271P0C7V0 271 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 GOLGA8HP0CJ92 632 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 SMIM10L2AP0DMW4 78 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 SMIM10L2BP0DMW5 78 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 PDHBP11177 359 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 MYCLP12524 364 aaPredicted RBP5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 DNAJB1P25685 340 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ICAM3P32942 547 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 NOVP48745 357 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ZNF543Q08ER8 600 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 COASYQ13057 564 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 PTPN21Q16825 1174 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ZNF648Q5T619 568 aaPredicted RBP5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 SLC23A3Q6PIS1 610 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 LRFN4Q6PJG9 635 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ADGRD2Q7Z7M1 963 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 MCF2L2Q86YR7 1114 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 EFHBQ8N7U6 833 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ZNF507Q8TCN5 953 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 SPPL3Q8TCT6 385 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 MICAL1Q8TDZ2 1067 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 FAM168AQ92567 244 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 NKD2Q969F2 451 aaPredicted RBP5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ELMO3Q96BJ8 720 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 RIPOR3Q96MK2 946 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 SPATA33Q96N06 139 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 C16orf70Q9BSU1 422 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 UBA5Q9GZZ9 404 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 CPVLQ9H3G5 476 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 TLE6Q9H808 572 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 MLXIPQ9HAP2 919 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ZBTB40Q9NUA8 1239 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 SETD4Q9NVD3 440 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 COL20A1Q9P218 1284 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 FAM8A1Q9UBU6 413 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 BARX2Q9UMQ3 279 aaPredicted RBP5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 ABCB11O95342 1321 aa5.99□□□□□ -1.45
TUBGCP4-209ENST00000564511 FLNBO75369 2602 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 NCOR2Q9Y618 2525 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 MYO7AQ13402 2215 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 ENPP3O14638 875 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 PER2O15055 1255 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 ORC4O43929 436 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 CAND2O75155 1236 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 GLP2RO95838 553 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 CFBP00751 764 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 P4HBP07237 508 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 HSPD1P10809 573 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 GNAT1P11488 350 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 NBL1P41271 181 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 SP2Q02086 613 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 ST3GAL2Q16842 350 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 CELF3Q5SZQ8 465 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 GPATCH4Q5T3I0 446 aaKnown RBP5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 KCNV1Q6PIU1 500 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 ARMCX6Q7L4S7 300 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 CYFIP1Q7L576 1253 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 ADSSL1Q8N142 457 aa5.98□□□□□ -1.45
TUBGCP4-209ENST00000564511 KCT2Q8NC54 265 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms