RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 GRM5P41594 1212 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 SMTNP53814 917 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 STRN3Q13033 797 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 COASYQ13057 564 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 PTPN14Q15678 1187 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 SMAD2Q15796 467 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 ZNF568Q3ZCX4 644 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 RRAGBQ5VZM2 374 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 MPZL3Q6UWV2 235 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 ZPBP2Q6X784 338 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 HAUS6Q7Z4H7 955 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 APBB1IPQ7Z5R6 666 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 ZBTB33Q86T24 672 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 FAM178BQ8IXR5 827 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 ZBTB45Q96K62 511 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 FIZ1Q96SL8 496 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 PAAF1Q9BRP4 392 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 HERC2P3Q9BVR0 1158 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 COLEC11Q9BWP8 271 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 STK39Q9UEW8 545 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 HCFC2Q9Y5Z7 792 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 ANK1P16157 1881 aa9.02□□□□□ -0.97
NSMCE1-207ENST00000564342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 MYMKA6NI61 221 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 H0YCG3 227 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 K7ENM7 598 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 MEFVO15553 781 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 TRAK2O60296 914 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 TBCAO75347 108 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 NR1I2O75469 434 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 TOM1L1O75674 476 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 THP07101 528 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 VCANP13611 3396 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 CA8P35219 290 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 OSTNP61366 133 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 HSP90AA2PQ14568 343 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 BMS1Q14692 1282 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 XKR4Q5GH76 650 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 GLRA4Q5JXX5 417 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 ANKRD54Q6NXT1 300 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 LLGL2Q6P1M3 1020 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 FUT10Q6P4F1 479 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 SYCE2Q6PIF2 218 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 CCDC73Q6ZRK6 1079 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 DYMQ7RTS9 669 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 DENND4AQ7Z401 1863 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 MYCT1Q8N699 235 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 SMRP1Q8NCR6 262 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 SLC22A17Q8WUG5 538 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 KLHL5Q96PQ7 755 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 PPP1R10Q96QC0 940 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 TCHPQ9BT92 498 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 CCDC94Q9BW85 323 aaPredicted RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 HAPLN2Q9GZV7 340 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 ZHX3Q9H4I2 956 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 ADAM28Q9UKQ2 775 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 FAM50BQ9Y247 325 aa9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 MTCL1Q9Y4B5 1905 aaKnown RBP9.01□□□□□ -0.97
NSMCE1-207ENST00000564342 SMIM28A0A1B0GU29 152 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 CASTOR2A6NHX0 329 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 CUTAO60888 179 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 KIF4AO95239 1232 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 PIGRP01833 764 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 URODP06132 367 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 CNPP09543 421 aaKnown RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 SRGAP2BP0DMP2 458 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 HARSP12081 509 aaKnown RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 SCP2P22307 547 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 NMT1P30419 496 aaKnown RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 STAT6P42226 847 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 GLUD2P49448 558 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 GTF2BQ00403 316 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 ZP2Q05996 745 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 MCL1Q07820 350 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 NOLC1Q14978 699 aaKnown RBP eCLIP9□□□□□ -0.97
NSMCE1-207ENST00000564342 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 SEZ6Q53EL9 994 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 AXDND1Q5T1B0 1012 aaPredicted RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 KIAA0319Q5VV43 1072 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 SHC4Q6S5L8 630 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 ALKAL1Q6UXT8 129 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 SV2BQ7L1I2 683 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 SFR1Q86XK3 245 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 PDILTQ8N807 584 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 DDX12PQ92771 950 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 CASP10Q92851 521 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 DNAJC19Q96DA6 116 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 SNX27Q96L92 541 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 ZMAT2Q96NC0 199 aaKnown RBP9□□□□□ -0.97
NSMCE1-207ENST00000564342 ACAP3Q96P50 834 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 PANK2Q9BZ23 570 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 GPR62Q9BZJ7 368 aa9□□□□□ -0.97
NSMCE1-207ENST00000564342 S1PR5Q9H228 398 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms