RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PPP2R3AQ06190 1150 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 GRIN2CQ14957 1233 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 FOXR2Q6PJQ5 311 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 SLC9A9Q8IVB4 645 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 COLGALT2Q8IYK4 626 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 HPS3Q969F9 1004 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 DDX27Q96GQ7 796 aaKnown RBP18.18■□□□□ 0.5
RNF40-206ENST00000564260 FBXL18Q96ME1 805 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 PPP1R10Q96QC0 940 aaKnown RBP18.18■□□□□ 0.5
RNF40-206ENST00000564260 HAPLN2Q9GZV7 340 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 NRDE2Q9H7Z3 1164 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 AGPAT3Q9NRZ7 376 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 PUF60Q9UHX1 559 aaKnown RBP18.18■□□□□ 0.5
RNF40-206ENST00000564260 GDAQ9Y2T3 454 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 C2CD2Q9Y426 696 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 SMIM28A0A1B0GU29 152 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 FSD2A1L4K1 749 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 PTGESO14684 152 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 TGFB1I1O43294 461 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 EXTL3O43909 919 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 ZC3H11AO75152 810 aaKnown RBP eCLIP18.17■□□□□ 0.5
RNF40-206ENST00000564260 POMCP01189 267 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 GALTP07902 379 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 CYP3A5P20815 502 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 HOXD13P35453 343 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 GPM6BQ13491 265 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
RNF40-206ENST00000564260 SURF1Q15526 300 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 SLC10A6Q3KNW5 377 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 GPR65Q8IYL9 337 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 SLC39A11Q8N1S5 342 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 CEP120Q8N960 986 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 TMEM169Q96HH4 297 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 TRAF3IP3Q9Y228 551 aa18.17■□□□□ 0.5
RNF40-206ENST00000564260 TMEM189-UBE2V1I3L0A0 370 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 CALUO43852 315 aaPredicted RBP18.16■□□□□ 0.5
RNF40-206ENST00000564260 FGF18O76093 207 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 HARSP12081 509 aaKnown RBP18.16■□□□□ 0.5
RNF40-206ENST00000564260 RPL9P32969 192 aaKnown RBP18.16■□□□□ 0.5
RNF40-206ENST00000564260 STIM1Q13586 685 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 GPD1LQ8N335 351 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 MRPL38Q96DV4 380 aaKnown RBP18.16■□□□□ 0.5
RNF40-206ENST00000564260 CDX2Q99626 313 aaPredicted RBP18.16■□□□□ 0.5
RNF40-206ENST00000564260 COLEC11Q9BWP8 271 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 KCTD10Q9H3F6 313 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 FAN1Q9Y2M0 1017 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 TRANK1O15050 2925 aa18.16■□□□□ 0.5
RNF40-206ENST00000564260 DDHD2O94830 711 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 ENPEPQ07075 957 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 NAB2Q15742 525 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 ENOX2Q16206 610 aaKnown RBP18.15■□□□□ 0.5
RNF40-206ENST00000564260 EDRF1Q3B7T1 1238 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 TIGD5Q53EQ6 642 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 ZNF280BQ86YH2 543 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 BRSK2Q8IWQ3 736 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 XXYLT1Q8NBI6 393 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 PPP2R3CQ969Q6 453 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 IGSF21Q96ID5 467 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 GUCD1Q96NT3 240 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 CLSTN2Q9H4D0 955 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 MIOSQ9NXC5 875 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 HSPBP1Q9NZL4 362 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 KLK14Q9P0G3 267 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 KIAA1468Q9P260 1216 aa18.15■□□□□ 0.5
RNF40-206ENST00000564260 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
RNF40-206ENST00000564260 CDH23Q9H251 3354 aa18.14■□□□□ 0.5
RNF40-206ENST00000564260 ZNF233A6NK53 670 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 MAPK13O15264 365 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 LPXNO60711 386 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 CXCL8P10145 99 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 RPL13P26373 211 aaKnown RBP18.14■□□□□ 0.49
RNF40-206ENST00000564260 SLC11A1P49279 550 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 AFF1P51825 1210 aaKnown RBP18.14■□□□□ 0.49
RNF40-206ENST00000564260 OSTNP61366 133 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 ELAVL2Q12926 359 aaKnown RBP18.14■□□□□ 0.49
RNF40-206ENST00000564260 ZBTB6Q15916 424 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 Q7L0L9 218 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 DDX53Q86TM3 631 aaKnown RBP18.14■□□□□ 0.49
RNF40-206ENST00000564260 NELFCDQ8IXH7 590 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 SPPL3Q8TCT6 385 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 CBWD1Q9BRT8 395 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 NGRNQ9NPE2 291 aaKnown RBP18.14■□□□□ 0.49
RNF40-206ENST00000564260 MTUS1Q9ULD2 1270 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 SSX2IPQ9Y2D8 614 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 STXBP5LQ9Y2K9 1186 aa18.14■□□□□ 0.49
RNF40-206ENST00000564260 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 NRP1O14786 923 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 ITGB1P05556 798 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 FOSL2P15408 326 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 LRRC63Q05C16 580 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
RNF40-206ENST00000564260 USP37Q86T82 979 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 DHTKD1Q96HY7 919 aaPredicted RBP18.13■□□□□ 0.49
RNF40-206ENST00000564260 FAM213AQ9BRX8 229 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 NUP62CLQ9H1M0 184 aa18.13■□□□□ 0.49
RNF40-206ENST00000564260 CERS4Q9HA82 394 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms