RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 ATP9AO75110 1047 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 ALDH2P05091 517 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 ATXN1LP0C7T5 689 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 FBN1P35555 2871 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 NFKB2Q00653 900 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 ZNF638Q14966 1978 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 MFSD6LQ8IWD5 586 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 TMEM176AQ96HP8 235 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 GAD1Q99259 594 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 STARD5Q9NSY2 213 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 MARCH5Q9NX47 278 aa12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
HDGFL3-204ENST00000563790 STAB1Q9NY15 2570 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 GOLIM4O00461 696 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 NRP1O14786 923 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 FIBPO43427 364 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 NMT2O60551 498 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 DDHD2O94830 711 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 PTGER3P43115 390 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 DGKEP52429 567 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 TLE1Q04724 770 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 BAHD1Q8TBE0 780 aaPredicted RBP12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 SEPT1Q8WYJ6 367 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 RTTNQ86VV8 2226 aa12.23□□□□□ -0.45
HDGFL3-204ENST00000563790 JMJD1CQ15652 2540 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 LRRK1Q38SD2 2015 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 NCANO14594 1321 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 ATXN2Q99700 1313 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 OPLAHO14841 1288 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 CHADO15335 359 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 GPR32O75388 356 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 OFD1O75665 1012 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 STAM2O75886 525 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 RHOP08100 348 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 CREMQ03060 361 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 ZNF543Q08ER8 600 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 OS9Q13438 667 aaPredicted RBP12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 GRM4Q14833 912 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 RTP5Q14D33 572 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 LPCAT2Q7L5N7 544 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 SYT13Q7L8C5 426 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 SMARCD2Q92925 531 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 CSRNP2Q9H175 543 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 DACT1Q9NYF0 836 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 AK5Q9Y6K8 562 aa12.22□□□□□ -0.45
HDGFL3-204ENST00000563790 TMEM131Q92545 1883 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 GNAI3P08754 354 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 PDHBP11177 359 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 KLRC1P26715 233 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 MRPS9P82933 396 aaKnown RBP12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 UBE3CQ15386 1083 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 SPDYCQ5MJ68 293 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 BROXQ5VW32 411 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 GIMAP8Q8ND71 665 aaPredicted RBP12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 LPPQ93052 612 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 TRPV4Q9HBA0 871 aa12.21□□□□□ -0.45
HDGFL3-204ENST00000563790 WDR27A2RRH5 827 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 CHGBP05060 677 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 SYPP08247 313 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 ITPKAP23677 461 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 VIPR2P41587 438 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 PHKA2P46019 1235 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 LYSMD4Q5XG99 296 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 NFXL1Q6ZNB6 911 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 ARMCX6Q7L4S7 300 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 ZC3H18Q86VM9 953 aaKnown RBP12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 TMPRSS12Q86WS5 348 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 ERICH1Q86X53 443 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 SLC7A14Q8TBB6 771 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 STRBPQ96SI9 672 aaKnown RBP12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 TMEM209Q96SK2 561 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 PPP1R16BQ96T49 567 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 LGMNQ99538 433 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 PUS7LQ9H0K6 701 aaKnown RBP12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 ARID2Q68CP9 1835 aa12.2□□□□□ -0.46
HDGFL3-204ENST00000563790 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 ITGB2P05107 769 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 VAC14Q08AM6 782 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 FCHO2Q0JRZ9 810 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 NBR1Q14596 966 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 PRSS36Q5K4E3 855 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 EXD3Q8N9H8 876 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 TSC1Q92574 1164 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 B3GALT6Q96L58 329 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 PCYT2Q99447 389 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 TPSD1Q9BZJ3 242 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 NRSN2Q9GZP1 204 aa12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDGFL3-204ENST00000563790 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms