RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 BIRC3Q13489 604 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 DPY19L2P1Q6NXN4 242 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 PDXDC1Q6P996 788 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 CYP26C1Q6V0L0 522 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 EHBP1Q8NDI1 1231 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 KIAA1524Q8TCG1 905 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 SPAG5Q96R06 1193 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 TRIM6Q9C030 488 aaPredicted RBP23.75■■□□□ 1.39
LINC01960-201ENST00000563759 NUCKS1Q9H1E3 243 aaKnown RBP23.75■■□□□ 1.39
LINC01960-201ENST00000563759 FBXL5Q9UKA1 691 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 PDCD11Q14690 1871 aaKnown RBP23.75■■□□□ 1.39
LINC01960-201ENST00000563759 RAPGEF1Q13905 1077 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 WDR49Q8IV35 697 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 TMEM192Q8IY95 271 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 TAS1R2Q8TE23 839 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 FAM84AQ96KN4 292 aa23.75■■□□□ 1.39
LINC01960-201ENST00000563759 IL18RAPO95256 599 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 CHRNA1P02708 482 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 FECHP22830 423 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 GJB7Q6PEY0 223 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 FAM228AQ86W67 206 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 TMTC1Q8IUR5 882 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 LMO3Q8TAP4 145 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 ZNF516Q92618 1163 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 PLAGL2Q9UPG8 496 aa23.74■■□□□ 1.39
LINC01960-201ENST00000563759 NOC2LQ9Y3T9 749 aaKnown RBP23.74■■□□□ 1.39
LINC01960-201ENST00000563759 SOWAHDA6NJG2 315 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 B4GALT4O60513 344 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 RPS6KA5O75582 802 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 RFX1P22670 979 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 MGAT3Q09327 533 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 ZACNQ401N2 412 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 TDRD10Q5VZ19 366 aaKnown RBP23.73■■□□□ 1.39
LINC01960-201ENST00000563759 FBXO46Q6PJ61 603 aaPredicted RBP23.73■■□□□ 1.39
LINC01960-201ENST00000563759 C15orf39Q6ZRI6 1047 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 SLC43A3Q8NBI5 491 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 DHX38Q92620 1227 aaKnown RBP23.73■■□□□ 1.39
LINC01960-201ENST00000563759 OGDHLQ9ULD0 1010 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 COQ4Q9Y3A0 265 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 ARVCFO00192 962 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 PIK3CAP42336 1068 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 AP3M2P53677 418 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 MEA1Q16626 185 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 IQCEQ6IPM2 695 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 WDR59Q6PJI9 974 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 C17orf53Q8N3J3 647 aaPredicted RBP23.73■■□□□ 1.39
LINC01960-201ENST00000563759 CCDC94Q9BW85 323 aaPredicted RBP23.73■■□□□ 1.39
LINC01960-201ENST00000563759 EIF2AQ9BY44 585 aaKnown RBP23.73■■□□□ 1.39
LINC01960-201ENST00000563759 TRPV6Q9H1D0 765 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 RAB20Q9NX57 234 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 DAAM1Q9Y4D1 1078 aa23.73■■□□□ 1.39
LINC01960-201ENST00000563759 GRM5P41594 1212 aa23.72■■□□□ 1.39
LINC01960-201ENST00000563759 LBX1P52954 281 aa23.72■■□□□ 1.39
LINC01960-201ENST00000563759 SFMBT2Q5VUG0 894 aa23.72■■□□□ 1.39
LINC01960-201ENST00000563759 OR5B17Q8NGF7 314 aa23.72■■□□□ 1.39
LINC01960-201ENST00000563759 SEMA4DQ92854 862 aa23.72■■□□□ 1.39
LINC01960-201ENST00000563759 ACAP3Q96P50 834 aa23.72■■□□□ 1.39
LINC01960-201ENST00000563759 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.72■■□□□ 1.39
LINC01960-201ENST00000563759 MROH7Q68CQ1 1323 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 PHACTR2O75167 634 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 LRRN2O75325 713 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 C4BPAP04003 597 aaKnown RBP23.71■■□□□ 1.39
LINC01960-201ENST00000563759 TMEM191BP0C7N4 346 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 HNRNPH3P31942 346 aaKnown RBP23.71■■□□□ 1.39
LINC01960-201ENST00000563759 KCNJ6P48051 423 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 POU5F1Q01860 360 aaKnown RBP23.71■■□□□ 1.39
LINC01960-201ENST00000563759 E4F1Q66K89 784 aaPredicted RBP23.71■■□□□ 1.39
LINC01960-201ENST00000563759 GPIHBP1Q8IV16 184 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 MTMR12Q9C0I1 747 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 DNAJC12Q9UKB3 198 aa23.71■■□□□ 1.39
LINC01960-201ENST00000563759 AJAP1Q9UKB5 411 aaPredicted RBP23.71■■□□□ 1.39
LINC01960-201ENST00000563759 CAND2O75155 1236 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 CLSTN1O94985 981 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 TFAMQ00059 246 aaKnown RBP23.7■■□□□ 1.39
LINC01960-201ENST00000563759 NFX1Q12986 1120 aaKnown RBP23.7■■□□□ 1.39
LINC01960-201ENST00000563759 DUOXA2Q1HG44 320 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 PHLDB3Q6NSJ2 640 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 ZNF333Q96JL9 665 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 CHP1Q99653 195 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 SEZ6LQ9BYH1 1024 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 MYO6Q9UM54 1294 aa23.7■■□□□ 1.39
LINC01960-201ENST00000563759 HLA-DRAP01903 254 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 TNNC2P02585 160 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 MTF1Q14872 753 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 TRIM71Q2Q1W2 868 aaKnown RBP23.7■■□□□ 1.38
LINC01960-201ENST00000563759 TWF2Q6IBS0 349 aaKnown RBP23.7■■□□□ 1.38
LINC01960-201ENST00000563759 EFCAB13Q8IY85 973 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 SYN2Q92777 582 aaPredicted RBP23.7■■□□□ 1.38
LINC01960-201ENST00000563759 ANKRD36BP1Q96IX9 119 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 NT5C1BQ96P26 610 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 ST3GAL5Q9UNP4 418 aa23.7■■□□□ 1.38
LINC01960-201ENST00000563759 ARID5AQ03989 594 aa23.69■■□□□ 1.38
LINC01960-201ENST00000563759 PKN2Q16513 984 aaKnown RBP23.69■■□□□ 1.38
LINC01960-201ENST00000563759 ARHGEF19Q8IW93 802 aa23.69■■□□□ 1.38
LINC01960-201ENST00000563759 PPM1KQ8N3J5 372 aa23.69■■□□□ 1.38
LINC01960-201ENST00000563759 NXF3Q9H4D5 531 aaKnown RBP23.69■■□□□ 1.38
LINC01960-201ENST00000563759 ASB7Q9H672 318 aa23.69■■□□□ 1.38
LINC01960-201ENST00000563759 UBE2TQ9NPD8 197 aaPredicted RBP23.69■■□□□ 1.38
LINC01960-201ENST00000563759 C1orf112Q9NSG2 853 aa23.69■■□□□ 1.38
LINC01960-201ENST00000563759 LACTBL1A8MY62 500 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms