RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ENO4A6NNW6 628 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 GGPS1O95749 300 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 IRX1P78414 480 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ARHGEF18Q6ZSZ5 1173 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 HAUS6Q7Z4H7 955 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 SLC5A5Q92911 643 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 RPS6KC1Q96S38 1066 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 WDR11Q9BZH6 1224 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 SORBS3O60504 671 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 AP1G2O75843 785 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 IFNB1P01574 187 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 MYCLP12524 364 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ATF7P17544 494 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 MTM1Q13496 603 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 TAF11Q15544 211 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 SPDYCQ5MJ68 293 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ERICH1Q86X53 443 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ART4Q93070 314 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 SLC12A4Q9UP95 1085 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 CTNNA2P26232 953 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 PCK1P35558 622 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 MSH2P43246 934 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 SESN3P58005 492 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 DNAJC3Q13217 504 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 RBBP5Q15291 538 aaKnown RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 HAUS1Q96CS2 278 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ROPN1BQ9BZX4 212 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 ROPN1Q9HAT0 212 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-203ENST00000563623 SAYSD1Q9NPB0 183 aa12.61□□□□□ -0.39
ABCA3-203ENST00000563623 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 AFF2P51816 1311 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 EXOC1LA0A1B0GW35 172 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 CD58P19256 250 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 IL9RQ01113 521 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 IZUMO3Q5VZ72 239 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 CYFIP1Q7L576 1253 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 C4orf33Q8N1A6 199 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 RMDN2Q96LZ7 410 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 TMEM117Q9H0C3 514 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 TMEM206Q9H813 350 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 TTC4O95801 387 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 PEX5P50542 639 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 STRN3Q13033 797 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 MEX3CQ5U5Q3 659 aaKnown RBP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 CYP4X1Q8N118 509 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 GBP7Q8N8V2 638 aaPredicted RBP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 ARMC2Q8NEN0 867 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 ERP27Q96DN0 273 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 SERPINB12Q96P63 405 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 NAALADL1Q9UQQ1 740 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 ZNF148Q9UQR1 794 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
ABCA3-203ENST00000563623 PSMD10O75832 226 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 GYS1P13807 737 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 HHATQ5VTY9 493 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 FITM2Q8N6M3 262 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 CCHCR1Q8TD31 782 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 POMGNT1Q8WZA1 660 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 FBXO28Q9NVF7 368 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
ABCA3-203ENST00000563623 RALAP11233 206 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 CYP11B1P15538 503 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 ITIH2P19823 946 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
ABCA3-203ENST00000563623 CIITAP33076 1130 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 CETN2P41208 172 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 ZNF131P52739 623 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 CRYMQ14894 314 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 GRK7Q8WTQ7 553 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 ZBTB10Q96DT7 871 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 KREMEN1Q96MU8 473 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 TMEM237Q96Q45 408 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 C11orf70Q9BRQ4 267 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 GOLGA8SH3BPF8 625 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 GOLGA8MH3BSY2 632 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 UPP2O95045 317 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 CHRNB2P17787 502 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 CA4P22748 312 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 ANKRD35Q8N283 1001 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 DMAC2Q9NW81 257 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 NINJ2Q9NZG7 142 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 MYH11P35749 1972 aa12.59□□□□□ -0.39
ABCA3-203ENST00000563623 IGLV3-22A0A075B6J6 115 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 C21orf2O43822 256 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 RFX1P22670 979 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms