RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SNTG2Q9NY99 539 aa20.63■□□□□ 0.89
NME3-204ENST00000563498 FANCMQ8IYD8 2048 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 A0A087WWV3 80 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 TTLL13PA6NNM8 815 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 WNT7AO00755 349 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 GLULP15104 373 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 ATP2B1P20020 1258 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 PRKCQQ04759 706 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 PRPF4BQ13523 1007 aaKnown RBP20.62■□□□□ 0.89
NME3-204ENST00000563498 RAB33AQ14088 237 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 MAPK6Q16659 721 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.62■□□□□ 0.89
NME3-204ENST00000563498 CATSPER3Q86XQ3 398 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 DIS3L2Q8IYB7 885 aaKnown RBP20.62■□□□□ 0.89
NME3-204ENST00000563498 GTF3C6Q969F1 213 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 BORCS6Q96GS4 357 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 ADPGKQ9BRR6 497 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 FOXQ1Q9C009 403 aa20.62■□□□□ 0.89
NME3-204ENST00000563498 MYH15Q9Y2K3 1946 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 KANSL1LA0AUZ9 987 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 TMEM189-UBE2V1I3L0A0 370 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 ACKR2O00590 384 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
NME3-204ENST00000563498 NTHL1P78549 312 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 AXDND1Q5T1B0 1012 aaPredicted RBP20.61■□□□□ 0.89
NME3-204ENST00000563498 ST13P5Q8NFI4 369 aaPredicted RBP20.61■□□□□ 0.89
NME3-204ENST00000563498 POLR3CQ9BUI4 534 aaPredicted RBP20.61■□□□□ 0.89
NME3-204ENST00000563498 OSBPL6Q9BZF3 934 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 CCDC113Q9H0I3 377 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 KCNH3Q9ULD8 1083 aa20.61■□□□□ 0.89
NME3-204ENST00000563498 CCL16O15467 120 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 ADAM12O43184 909 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 MED24O75448 989 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 PRKCBP05771 671 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 FGFR3P22607 806 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 NAMPTP43490 491 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 PFKPQ01813 784 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 TRIM29Q14134 588 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 MLF2Q15773 248 aaPredicted RBP20.6■□□□□ 0.89
NME3-204ENST00000563498 ME3Q16798 604 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 TMEM132AQ24JP5 1023 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 ZNF528Q3MIS6 628 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 RSPO2Q6UXX9 243 aaPredicted RBP20.6■□□□□ 0.89
NME3-204ENST00000563498 NOSTRINQ8IVI9 506 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 MAML2Q8IZL2 1156 aaPredicted RBP20.6■□□□□ 0.89
NME3-204ENST00000563498 NECAB1Q8N987 351 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 SLC7A14Q8TBB6 771 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 BSNDQ8WZ55 320 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 RUBCNQ92622 972 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 RMDN1Q96DB5 314 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 MTRRQ9UBK8 725 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 POLIQ9UNA4 740 aa20.6■□□□□ 0.89
NME3-204ENST00000563498 CYP11B2P19099 503 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 SNW1Q13573 536 aaKnown RBP20.59■□□□□ 0.89
NME3-204ENST00000563498 PPP2R5AQ15172 486 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 DCAF4L1Q3SXM0 396 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 SLC44A4Q53GD3 710 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 PADI6Q6TGC4 694 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 NSUN7Q8NE18 718 aaKnown RBP20.59■□□□□ 0.89
NME3-204ENST00000563498 ITFG1Q8TB96 612 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 BCO2Q9BYV7 579 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 CXCL16Q9H2A7 254 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 TMEM60Q9H2L4 133 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 FBXO4Q9UKT5 387 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 DOCK6Q96HP0 2047 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 VWA8A3KMH1 1905 aa20.59■□□□□ 0.89
NME3-204ENST00000563498 RPA1P27694 616 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 OR1D2P34982 312 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 MAGEA9P43362 315 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 NPAS3Q8IXF0 933 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 KIAA2013Q8IYS2 634 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 ERMNQ8TAM6 284 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 UROC1Q96N76 676 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 PPP1R10Q96QC0 940 aaKnown RBP20.58■□□□□ 0.89
NME3-204ENST00000563498 BACE2Q9Y5Z0 518 aa20.58■□□□□ 0.89
NME3-204ENST00000563498 MIA3Q5JRA6 1907 aa20.58■□□□□ 0.88
NME3-204ENST00000563498 DMXL1Q9Y485 3027 aa20.58■□□□□ 0.88
NME3-204ENST00000563498 OTOGLQ3ZCN5 2332 aa20.58■□□□□ 0.88
NME3-204ENST00000563498 ARHGEF35A5YM69 484 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 KINO60870 393 aaKnown RBP20.57■□□□□ 0.88
NME3-204ENST00000563498 LRRN2O75325 713 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 B3GAT3O94766 335 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 MUTP22033 750 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 MCM7P33993 719 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 EFNA5P52803 228 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 ORC2Q13416 577 aaPredicted RBP20.57■□□□□ 0.88
NME3-204ENST00000563498 PABPC1LQ4VXU2 614 aaKnown RBP20.57■□□□□ 0.88
NME3-204ENST00000563498 EEF1DP3Q658K8 133 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 SUMF1Q8NBK3 374 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 HINFPQ9BQA5 517 aa20.57■□□□□ 0.88
NME3-204ENST00000563498 DNMT3BQ9UBC3 853 aaKnown RBP20.57■□□□□ 0.88
NME3-204ENST00000563498 CACNA1IQ9P0X4 2223 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 TRAPPC3O43617 180 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 LARGE1O95461 756 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 EDN1P05305 212 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 PUM1Q14671 1186 aaKnown RBP eCLIP20.56■□□□□ 0.88
NME3-204ENST00000563498 UPP1Q16831 310 aa20.56■□□□□ 0.88
NME3-204ENST00000563498 ANKS3Q6ZW76 656 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms