RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ALDH2P05091 517 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 ADRB2P07550 413 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 KCNE1P15382 129 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 ABCD1P33897 745 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 GTF2F1P35269 517 aaKnown RBP eCLIP9.34□□□□□ -0.91
UBR1-204ENST00000563239 PPM1AP35813 382 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 TNFSF9P41273 254 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 ALDH7A1P49419 539 aaKnown RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 LIG4P49917 911 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 SOX4Q06945 474 aaPredicted RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 PTPROQ16827 1216 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 TCEAL5Q5H9L2 206 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 GLRA4Q5JXX5 417 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 CD300LGQ6UXG3 332 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 KRBA2Q6ZNG9 492 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 TAS1R1Q7RTX1 841 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 ADGRD2Q7Z7M1 963 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 DDX53Q86TM3 631 aaKnown RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 RNF168Q8IYW5 571 aaPredicted RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 CEP57L1Q8IYX8 460 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 TMEM130Q8N3G9 435 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 ZSWIM2Q8NEG5 633 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 RABGGTAQ92696 567 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 BICD1Q96G01 975 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 ACAP3Q96P50 834 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 CCDC94Q9BW85 323 aaPredicted RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 NSUN3Q9H649 340 aaKnown RBP9.34□□□□□ -0.91
UBR1-204ENST00000563239 CNTN3Q9P232 1028 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 FAN1Q9Y2M0 1017 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 PCDHB13Q9Y5F0 798 aa9.34□□□□□ -0.91
UBR1-204ENST00000563239 MYO7AQ13402 2215 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 HIDE1A8MVS5 230 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 OGTO15294 1046 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 THP07101 528 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 CLTAP09496 248 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 CXCL8P10145 99 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 OR1G1P47890 313 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 HYAL1Q12794 435 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 DPYDQ12882 1025 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 TUSC3Q13454 348 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 ALCAMQ13740 583 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 ZBTB6Q15916 424 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 ENOX2Q16206 610 aaKnown RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 TIGD5Q53EQ6 642 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 FAM26FQ5R3K3 315 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 CRELD2Q6UXH1 353 aaPredicted RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 APBB1IPQ7Z5R6 666 aaPredicted RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 ZNF507Q8TCN5 953 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 SCFD1Q8WVM8 642 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 FAM122AQ96E09 287 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 FAM193BQ96PV7 902 aaPredicted RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 ACCSQ96QU6 501 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 ZBP1Q9H171 429 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 TLR9Q9NR96 1032 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 RAPGEFL1Q9UHV5 662 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 CPSF3Q9UKF6 684 aaKnown RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 PRG3Q9Y2Y8 225 aaPredicted RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 VCANP13611 3396 aa9.33□□□□□ -0.92
UBR1-204ENST00000563239 TDRD15B5MCY1 1934 aaKnown RBP9.33□□□□□ -0.92
UBR1-204ENST00000563239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.32□□□□□ -0.92
UBR1-204ENST00000563239 C2orf71A6NGG8 1288 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 CASTOR2A6NHX0 329 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 LACTBL1A8MY62 500 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 EIF3DO15371 548 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBR1-204ENST00000563239 TGFB1I1O43294 461 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 LILRB3O75022 631 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 LTBRP36941 435 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 YARSP54577 528 aaKnown RBP9.32□□□□□ -0.92
UBR1-204ENST00000563239 WNT7BP56706 349 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 KRT17Q04695 432 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 STK4Q13043 487 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 KCNC3Q14003 757 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 BMT2Q1RMZ1 405 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 SLFN12LQ6IEE8 588 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 VPS52Q8N1B4 723 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 MRPL43Q8N983 215 aaKnown RBP9.32□□□□□ -0.92
UBR1-204ENST00000563239 KIAA0895Q8NCT3 520 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 AUTS2Q8WXX7 1259 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 C18orf25Q96B23 403 aaPredicted RBP9.32□□□□□ -0.92
UBR1-204ENST00000563239 TMEM169Q96HH4 297 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 RPS6KC1Q96S38 1066 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 TCF25Q9BQ70 676 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 CBWD1Q9BRT8 395 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 MSTO1Q9BUK6 570 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 GPR62Q9BZJ7 368 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 GOLGA2P5Q9HBQ8 144 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 SLC39A2Q9NP94 309 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 TOPORSQ9NS56 1045 aaPredicted RBP9.32□□□□□ -0.92
UBR1-204ENST00000563239 PUF60Q9UHX1 559 aaKnown RBP9.32□□□□□ -0.92
UBR1-204ENST00000563239 TRIP11Q15643 1979 aa9.32□□□□□ -0.92
UBR1-204ENST00000563239 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 PER2O15055 1255 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 LINC01565O15544 149 aa9.31□□□□□ -0.92
UBR1-204ENST00000563239 NR1I2O75469 434 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms