RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 STX17P56962 302 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 RNASELQ05823 741 aaKnown RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 ADAM9Q13443 819 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 ENOX2Q16206 610 aaKnown RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 SNRNP35Q16560 246 aaKnown RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 FAM109BQ6ICB4 259 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 BRSK2Q8IWQ3 736 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 CD302Q8IX05 232 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 FBXL18Q96ME1 805 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 ZFP42Q96MM3 310 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 CASD1Q96PB1 797 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 RC3H2Q9HBD1 1191 aaKnown RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 DMAC2Q9NW81 257 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 FGFR1OPO95684 399 aaKnown RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 ERCC5P28715 1186 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 SCNN1GP51170 649 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 PMS1P54277 932 aaKnown RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 GRIK3Q13003 919 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 TPD52L1Q16890 204 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 SLC10A6Q3KNW5 377 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 TTI2Q6NXR4 508 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 CRELD2Q6UXH1 353 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 CBWD2Q8IUF1 395 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 FIBCD1Q8N539 461 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 RDH13Q8NBN7 331 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 FAM193BQ96PV7 902 aaPredicted RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 NAT10Q9H0A0 1025 aaKnown RBP20.45■□□□□ 0.86
RAB40C-207ENST00000563109 CNTN3Q9P232 1028 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 TRIP11Q15643 1979 aa20.45■□□□□ 0.86
RAB40C-207ENST00000563109 TTC26A0AVF1 554 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 POMCP01189 267 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 EPB41P11171 864 aaKnown RBP20.44■□□□□ 0.86
RAB40C-207ENST00000563109 SMAD3P84022 425 aaKnown RBP20.44■□□□□ 0.86
RAB40C-207ENST00000563109 SURF1Q15526 300 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 SPOUT1Q5T280 376 aaKnown RBP20.44■□□□□ 0.86
RAB40C-207ENST00000563109 CSGALNACT2Q8N6G5 542 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 ZSWIM2Q8NEG5 633 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 CEP63Q96MT8 703 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 TSPAN18Q96SJ8 248 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 ASB7Q9H672 318 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 TBC1D13Q9NVG8 400 aa20.44■□□□□ 0.86
RAB40C-207ENST00000563109 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.44■□□□□ 0.86
RAB40C-207ENST00000563109 KIAA1671Q9BY89 1806 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 LACTBL1A8MY62 500 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 SLC16A3O15427 465 aaKnown RBP20.43■□□□□ 0.86
RAB40C-207ENST00000563109 XPOTO43592 962 aaKnown RBP20.43■□□□□ 0.86
RAB40C-207ENST00000563109 THP07101 528 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 PSMC2P35998 433 aaKnown RBP20.43■□□□□ 0.86
RAB40C-207ENST00000563109 LRIT3Q3SXY7 679 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 GLRA4Q5JXX5 417 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 ALKAL1Q6UXT8 129 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 USP37Q86T82 979 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 FAM186BQ8IYM0 893 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 SP7Q8TDD2 431 aaPredicted RBP20.43■□□□□ 0.86
RAB40C-207ENST00000563109 KIF12Q96FN5 646 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 MKNK1Q9BUB5 465 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 DNAJC25Q9H1X3 360 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 SLC38A7Q9NVC3 462 aa20.43■□□□□ 0.86
RAB40C-207ENST00000563109 NLRC5Q86WI3 1866 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 SMIM28A0A1B0GU29 152 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 PTGESO14684 152 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 MAPK13O15264 365 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 ADRB2P07550 413 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 KRT13P13646 458 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 KCNE1P15382 129 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 CYP24A1Q07973 514 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 ANO6Q4KMQ2 910 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 XKR4Q5GH76 650 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 LRRC55Q6ZSA7 311 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 C11orf57Q6ZUT1 292 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-207ENST00000563109 ZC3H3Q8IXZ2 948 aaKnown RBP20.42■□□□□ 0.86
RAB40C-207ENST00000563109 FNBP1Q96RU3 617 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 DUSP9Q99956 384 aaKnown RBP20.42■□□□□ 0.86
RAB40C-207ENST00000563109 PBX4Q9BYU1 374 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 GZF1Q9H116 711 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-207ENST00000563109 DERAQ9Y315 318 aa20.42■□□□□ 0.86
RAB40C-207ENST00000563109 LCHNA4D1U4 455 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 CARNS1A5YM72 827 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 AKAP3O75969 853 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 CA3P07451 260 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 LAG3P18627 525 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 CASP4P49662 377 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 AFF1P51825 1210 aaKnown RBP20.41■□□□□ 0.86
RAB40C-207ENST00000563109 TMEM132DQ14C87 1099 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 PSMD6Q15008 389 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 INTS8Q75QN2 995 aaKnown RBP20.41■□□□□ 0.86
RAB40C-207ENST00000563109 NT5DC4Q86YG4 428 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 GSTCDQ8NEC7 633 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 EEF2KMTQ96G04 330 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 MFSD14AQ96MC6 490 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 PPP1R10Q96QC0 940 aaKnown RBP20.41■□□□□ 0.86
RAB40C-207ENST00000563109 AAASQ9NRG9 546 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 MIOSQ9NXC5 875 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 RWDD3Q9Y3V2 267 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 C2CD2Q9Y426 696 aa20.41■□□□□ 0.86
RAB40C-207ENST00000563109 MRPL42Q9Y6G3 142 aaKnown RBP20.41■□□□□ 0.86
RAB40C-207ENST00000563109 MEFVO15553 781 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-207ENST00000563109 ZC3H11AO75152 810 aaKnown RBP eCLIP20.4■□□□□ 0.86
RAB40C-207ENST00000563109 GNA14O95837 355 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms