RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 HOXC9P31274 260 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 INHBCP55103 352 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 DDX10Q13206 875 aaKnown RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 RRS1Q15050 365 aaKnown RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 VPS72Q15906 364 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 FKBP15Q5T1M5 1219 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 MEX3CQ5U5Q3 659 aaKnown RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 KIAA1841Q6NSI8 718 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 TIGD7Q6NT04 549 aaPredicted RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 ZNF662Q6ZS27 426 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 ZZZ3Q8IYH5 903 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 SYNPOQ8N3V7 929 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 IP6K1Q92551 441 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 MYL10Q9BUA6 226 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 POFUT1Q9H488 388 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 PRDM11Q9NQV5 511 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 POLKQ9UBT6 870 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 REXO2Q9Y3B8 237 aaKnown RBP6.09□□□□□ -1.43
SMG1-206ENST00000562668 KNSTRNQ9Y448 316 aa6.09□□□□□ -1.43
SMG1-206ENST00000562668 DISP2A7MBM2 1401 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 RGS12O14924 1447 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 INSRP06213 1382 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 SPATA31A1Q5TZJ5 1347 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 SPATA31A5Q5VU36 1347 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 SPATA31A7Q8IWB4 1347 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 WDR17Q8IZU2 1322 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 LRRC37A3O60309 1634 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 DAPK3O43293 454 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 MTSS1O43312 755 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 OPHN1O60890 802 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 PRPF6O94906 941 aaKnown RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 APOL3O95236 402 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 ATP2A2P16615 1042 aaKnown RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 SMAD3P84022 425 aaKnown RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 TOB2Q14106 344 aaPredicted RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 ZNF772Q68DY9 489 aaPredicted RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 MFSD5Q6N075 450 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 LDLRAD3Q86YD5 345 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 RTF1Q92541 710 aaKnown RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 LARP4BQ92615 738 aaKnown RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 CLIP3Q96DZ5 547 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 GPR87Q9BY21 358 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 IKZF4Q9H2S9 585 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
SMG1-206ENST00000562668 ZKSCAN5Q9Y2L8 839 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 CRB1P82279 1406 aa6.08□□□□□ -1.44
SMG1-206ENST00000562668 FLT4P35916 1363 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 RABGGTBP53611 331 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 INHBEP58166 350 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 SLC25A3Q00325 362 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 HSP90AB2PQ58FF8 381 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 CC2D1BQ5T0F9 858 aaKnown RBP6.07□□□□□ -1.44
SMG1-206ENST00000562668 EFHBQ8N7U6 833 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 ARL8AQ96BM9 186 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 CEP89Q96ST8 783 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 OSBPL6Q9BZF3 934 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 SLC2A4RGQ9NR83 387 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 NCDNQ9UBB6 729 aa6.07□□□□□ -1.44
SMG1-206ENST00000562668 TRPC5Q9UL62 973 aaPredicted RBP6.07□□□□□ -1.44
SMG1-206ENST00000562668 PKD1L3Q7Z443 1732 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 A0A087X1B8 175 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 KLRG2A4D1S0 409 aaPredicted RBP6.06□□□□□ -1.44
SMG1-206ENST00000562668 KPNA6O60684 536 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 GAS7O60861 476 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 IPO13O94829 963 aaKnown RBP6.06□□□□□ -1.44
SMG1-206ENST00000562668 CD40P25942 277 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 PPP2R1AP30153 589 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 KIR2DL3P43628 341 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 RBM6P78332 1123 aaKnown RBP6.06□□□□□ -1.44
SMG1-206ENST00000562668 DSG1Q02413 1049 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 SPIDRQ14159 915 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 TCEA2Q15560 299 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 MAN2A1Q16706 1144 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 HTR3DQ70Z44 454 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 MORC1Q86VD1 984 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 KIF18BQ86Y91 864 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 GSPT2Q8IYD1 628 aaKnown RBP6.06□□□□□ -1.44
SMG1-206ENST00000562668 CMTM4Q8IZR5 234 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 MB21D1Q8N884 522 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 UBXN4Q92575 508 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 HIST1H2AHQ96KK5 128 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 HIST1H2AJQ99878 128 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 NOL10Q9BSC4 688 aaKnown RBP6.06□□□□□ -1.44
SMG1-206ENST00000562668 C11orf21Q9P2W6 132 aa6.06□□□□□ -1.44
SMG1-206ENST00000562668 A0A0A6YYK5 440 aaPredicted RBP6.05□□□□□ -1.44
SMG1-206ENST00000562668 FSBPO95073 299 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 F2P00734 622 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 TNNT2P45379 298 aaPredicted RBP6.05□□□□□ -1.44
SMG1-206ENST00000562668 NPEPPSP55786 919 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 EIF4A2Q14240 407 aaKnown RBP6.05□□□□□ -1.44
SMG1-206ENST00000562668 SMN1Q16637 294 aaKnown RBP6.05□□□□□ -1.44
SMG1-206ENST00000562668 C1QL3Q5VWW1 255 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 UNQ6494/PRO21346Q6UXR6 183 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 ZNF627Q7L945 461 aa6.05□□□□□ -1.44
SMG1-206ENST00000562668 ELOA2Q8IYF1 753 aaPredicted RBP6.05□□□□□ -1.44
SMG1-206ENST00000562668 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
SMG1-206ENST00000562668 ZNF512Q96ME7 567 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms