RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 LEO1Q8WVC0 666 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-206ENST00000562610 SNX27Q96L92 541 aa17.64■□□□□ 0.41
COMMD4-206ENST00000562610 ACAP3Q96P50 834 aa17.64■□□□□ 0.41
COMMD4-206ENST00000562610 PAAF1Q9BRP4 392 aa17.64■□□□□ 0.41
COMMD4-206ENST00000562610 HERC2P3Q9BVR0 1158 aa17.64■□□□□ 0.41
COMMD4-206ENST00000562610 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
COMMD4-206ENST00000562610 RCOR1Q9UKL0 485 aa17.64■□□□□ 0.41
COMMD4-206ENST00000562610 MTCL1Q9Y4B5 1905 aaKnown RBP17.64■□□□□ 0.41
COMMD4-206ENST00000562610 C2CD2LO14523 706 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 GCNT3O95395 438 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 SOD2P04179 222 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 BMP1P13497 986 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 GTF2BQ00403 316 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 MCL1Q07820 350 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 PTPN14Q15678 1187 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 HERC4Q5GLZ8 1057 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-206ENST00000562610 FUT10Q6P4F1 479 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 MAP4K3Q8IVH8 894 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 CCDC65Q8IXS2 484 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 MRPL43Q8N983 215 aaKnown RBP17.63■□□□□ 0.41
COMMD4-206ENST00000562610 VN1R2Q8NFZ6 395 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 KCNN1Q92952 543 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 HVCN1Q96D96 273 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 UHRF1Q96T88 793 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-206ENST00000562610 PANK4Q9NVE7 773 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 CD207Q9UJ71 328 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 ADAM28Q9UKQ2 775 aa17.63■□□□□ 0.41
COMMD4-206ENST00000562610 C2orf16Q68DN1 1984 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 TADA2AO75478 443 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 KIF4AO95239 1232 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 PIGRP01833 764 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 IL9P15248 144 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 ASIC1P78348 528 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 AMPD3Q01432 767 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 NAB2Q15742 525 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 KIAA1841Q6NSI8 718 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 NECAB3Q96P71 396 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-206ENST00000562610 PPP1R10Q96QC0 940 aaKnown RBP17.62■□□□□ 0.41
COMMD4-206ENST00000562610 HAPLN2Q9GZV7 340 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 ST6GALNAC4Q9H4F1 302 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 MAGEF1Q9HAY2 307 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 GOLGA2P5Q9HBQ8 144 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 MRPL17Q9NRX2 175 aaKnown RBP17.62■□□□□ 0.41
COMMD4-206ENST00000562610 KBTBD4Q9NVX7 518 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 FAM50BQ9Y247 325 aa17.62■□□□□ 0.41
COMMD4-206ENST00000562610 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-206ENST00000562610 SMIM28A0A1B0GU29 152 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 CLASP2O75122 1294 aaKnown RBP17.61■□□□□ 0.41
COMMD4-206ENST00000562610 CXCL8P10145 99 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 GLUD2P49448 558 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 COASYQ13057 564 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 PUS10Q3MIT2 529 aaKnown RBP17.61■□□□□ 0.41
COMMD4-206ENST00000562610 SLC39A4Q6P5W5 647 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 ZNF720Q7Z2F6 126 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 PYM1Q9BRP8 204 aaKnown RBP17.61■□□□□ 0.41
COMMD4-206ENST00000562610 MSTO1Q9BUK6 570 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 TRIM9Q9C026 710 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 OLFML3Q9NRN5 406 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 SLC38A7Q9NVC3 462 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 CLEC1BQ9P126 229 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 CNTN3Q9P232 1028 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 KCNH3Q9ULD8 1083 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 HCFC2Q9Y5Z7 792 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 IRAK3Q9Y616 596 aa17.61■□□□□ 0.41
COMMD4-206ENST00000562610 SF3B1O75533 1304 aaKnown RBP eCLIP17.61■□□□□ 0.41
COMMD4-206ENST00000562610 A0A0C4DFX4 3053 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 FRMD3A2A2Y4 597 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 TISP43B9A030 160 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 OGTO15294 1046 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 CLTAP09496 248 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 MYBP10242 640 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 TNFSF9P41273 254 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 PPP2R3AQ06190 1150 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 SMAD4Q13485 552 aaKnown RBP17.6■□□□□ 0.41
COMMD4-206ENST00000562610 KYAT1Q16773 422 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 TAS1R1Q7RTX1 841 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 CEP57L1Q8IYX8 460 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 UROC1Q96N76 676 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 ZMAT2Q96NC0 199 aaKnown RBP17.6■□□□□ 0.41
COMMD4-206ENST00000562610 EMILIN2Q9BXX0 1053 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 GPR62Q9BZJ7 368 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-206ENST00000562610 EXOC7Q9UPT5 735 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 SSX2IPQ9Y2D8 614 aa17.6■□□□□ 0.41
COMMD4-206ENST00000562610 A0A1B0GVL5 298 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 GRXCR2A6NFK2 248 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 SPDYE4A6NLX3 237 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 ANKRD63C9JTQ0 380 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 PPP1R37O75864 691 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 PFKFB1P16118 471 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 AFMP43652 599 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 CLCNKBP51801 687 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 CASP5P51878 434 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 NUCB2P80303 420 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 SOX4Q06945 474 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-206ENST00000562610 ALCAMQ13740 583 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 SLC10A6Q3KNW5 377 aa17.59■□□□□ 0.41
COMMD4-206ENST00000562610 USP41Q3LFD5 358 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms