RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 ZSWIM1Q9BR11 485 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 REXO4Q9GZR2 422 aaKnown RBP4.47□□□□□ -1.69
DENND4A-205ENST00000562540 KCNG1Q9UIX4 513 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 CDY2AQ9Y6F7 541 aa4.47□□□□□ -1.69
DENND4A-205ENST00000562540 MRPL42Q9Y6G3 142 aaKnown RBP4.47□□□□□ -1.69
DENND4A-205ENST00000562540 LRRC3CA6NJW4 275 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 KDM1AO60341 852 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 RAB11FIP3O75154 756 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 SNRPA1P09661 255 aaKnown RBP4.46□□□□□ -1.7
DENND4A-205ENST00000562540 PTPN7P35236 360 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 OCA2Q04671 838 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 TERF2Q15554 542 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 MED25Q71SY5 747 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 SLC41A1Q8IVJ1 513 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 SMC1BQ8NDV3 1235 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 SCARB1Q8WTV0 552 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 FUBP3Q96I24 572 aaKnown RBP eCLIP4.46□□□□□ -1.7
DENND4A-205ENST00000562540 KLK15Q9H2R5 256 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 PRDM12Q9H4Q4 367 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 KANSL2Q9H9L4 492 aa4.46□□□□□ -1.7
DENND4A-205ENST00000562540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.46□□□□□ -1.7
DENND4A-205ENST00000562540 TMA7Q9Y2S6 64 aaKnown RBP4.46□□□□□ -1.7
DENND4A-205ENST00000562540 A0A1B0GTW7 788 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 CXorf49A8MYA2 514 aaPredicted RBP4.45□□□□□ -1.7
DENND4A-205ENST00000562540 ADCY6O43306 1168 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 CDC45O75419 566 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 POU3F2P20265 443 aaPredicted RBP4.45□□□□□ -1.7
DENND4A-205ENST00000562540 CTGFP29279 349 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 CXADRP78310 365 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 FAM47AQ5JRC9 791 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 HOMER1Q86YM7 354 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 REPS2Q8NFH8 660 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 APPBP2Q92624 585 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 ANKS1AQ92625 1134 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 PAWRQ96IZ0 340 aaKnown RBP4.45□□□□□ -1.7
DENND4A-205ENST00000562540 RNPC3Q96LT9 517 aaKnown RBP4.45□□□□□ -1.7
DENND4A-205ENST00000562540 HEPHQ9BQS7 1158 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 KRTAP1-5Q9BYS1 174 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 KCTD10Q9H3F6 313 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 RNPEPQ9H4A4 650 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 GALNT9Q9HCQ5 603 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 SPTLC3Q9NUV7 552 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 TMEM260Q9NX78 707 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 FOXJ2Q9P0K8 574 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 SLC17A6Q9P2U8 582 aa4.45□□□□□ -1.7
DENND4A-205ENST00000562540 LSSP48449 732 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 ZNF81P51508 661 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 LGALS4P56470 323 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 IL2P60568 153 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 SRSF4Q08170 494 aaKnown RBP4.44□□□□□ -1.7
DENND4A-205ENST00000562540 PITRM1Q5JRX3 1037 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 CNNM4Q6P4Q7 775 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 C11orf74Q86VG3 221 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 LRRTM3Q86VH5 581 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 DRC7Q8IY82 874 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 TRMT2AQ8IZ69 625 aaKnown RBP4.44□□□□□ -1.7
DENND4A-205ENST00000562540 SYNPOQ8N3V7 929 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 FUBP1Q96AE4 644 aaKnown RBP4.44□□□□□ -1.7
DENND4A-205ENST00000562540 AIFM2Q9BRQ8 373 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 FANCLQ9NW38 375 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 DMTF1Q9Y222 760 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 ARHGEF17Q96PE2 2063 aaPredicted RBP4.44□□□□□ -1.7
DENND4A-205ENST00000562540 RPTORQ8N122 1335 aa4.44□□□□□ -1.7
DENND4A-205ENST00000562540 COL3A1P02461 1466 aaPredicted RBP4.43□□□□□ -1.7
DENND4A-205ENST00000562540 PHF2O75151 1096 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 PROP1O75360 226 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 LPLP06858 475 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 FGFR4P22455 802 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 SCNN1BP51168 640 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 C21orf62-AS1Q17RA5 79 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 MST1LQ2TV78 715 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 RRP12Q5JTH9 1297 aaKnown RBP4.43□□□□□ -1.7
DENND4A-205ENST00000562540 AKNAD1Q5T1N1 836 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 GIMAP6Q6P9H5 292 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 ZNF572Q7Z3I7 529 aaPredicted RBP4.43□□□□□ -1.7
DENND4A-205ENST00000562540 FAM43AQ8N2R8 423 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 C9orf106Q8NAJ2 232 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 BOD1Q96IK1 185 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 PDLIM2Q96JY6 352 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 KMT5AQ9NQR1 393 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 TMEM74BQ9NUR3 256 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 ASB6Q9NWX5 421 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 KCNE5Q9UJ90 142 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 TBX22Q9Y458 520 aa4.43□□□□□ -1.7
DENND4A-205ENST00000562540 SETD1BQ9UPS6 1966 aaKnown RBP4.42□□□□□ -1.7
DENND4A-205ENST00000562540 FAM83GA6ND36 823 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 GPANK1O95872 356 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 HSD11B2P80365 405 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 PCBP1Q15365 356 aaKnown RBP eCLIP4.42□□□□□ -1.7
DENND4A-205ENST00000562540 TCEA2Q15560 299 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 THNSL2Q86YJ6 484 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 SH2D3CQ8N5H7 860 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 FBXO18Q8NFZ0 1043 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 OR2W6PQ8NHA6 318 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 PTCD3Q96EY7 689 aaKnown RBP4.42□□□□□ -1.7
DENND4A-205ENST00000562540 KCTD5Q9NXV2 234 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 NOC2LQ9Y3T9 749 aaKnown RBP4.42□□□□□ -1.7
DENND4A-205ENST00000562540 CD2APQ9Y5K6 639 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 PNPLA7Q6ZV29 1317 aa4.42□□□□□ -1.7
DENND4A-205ENST00000562540 TLDC2A0PJX2 215 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms