RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 ACTL7AQ9Y615 435 aa7.19□□□□□ -1.26
DENND4A-204ENST00000562028 ARID1BQ8NFD5 2236 aaPredicted RBP7.18□□□□□ -1.26
DENND4A-204ENST00000562028 TBKBP1A7MCY6 615 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 CXorf49A8MYA2 514 aaPredicted RBP7.18□□□□□ -1.26
DENND4A-204ENST00000562028 SNRPA1P09661 255 aaKnown RBP7.18□□□□□ -1.26
DENND4A-204ENST00000562028 SYN1P17600 705 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 FPR1P21462 350 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 HS1BP3Q53T59 392 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 HSP90AB2PQ58FF8 381 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 GPRIN1Q7Z2K8 1008 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 C3orf20Q8ND61 904 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 EDAQ92838 391 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 RUNDC1Q96C34 613 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 LOXL4Q96JB6 756 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 CPPED1Q9BRF8 314 aaPredicted RBP7.18□□□□□ -1.26
DENND4A-204ENST00000562028 LSM14BQ9BX40 385 aaKnown RBP7.18□□□□□ -1.26
DENND4A-204ENST00000562028 KMT5AQ9NQR1 393 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 MAN1C1Q9NR34 630 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 JAG2Q9Y219 1238 aa7.18□□□□□ -1.26
DENND4A-204ENST00000562028 FOXD2O60548 495 aaPredicted RBP7.17□□□□□ -1.26
DENND4A-204ENST00000562028 ARIH2O95376 493 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 RAP2AP10114 183 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 ATF3P18847 181 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 ALDH1A3P47895 512 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 CLRN1P58418 232 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 ATP2B3Q16720 1220 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 BMT2Q1RMZ1 405 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 SPTY2D1Q68D10 685 aaPredicted RBP7.17□□□□□ -1.26
DENND4A-204ENST00000562028 ANKS6Q68DC2 871 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 SEM1Q6ZVN7 128 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 SGMS1Q86VZ5 419 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 ELOA2Q8IYF1 753 aaPredicted RBP7.17□□□□□ -1.26
DENND4A-204ENST00000562028 SLC35B2Q8TB61 432 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 RAB24Q969Q5 203 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 RGMAQ96B86 450 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 WWC2-AS2Q96NR7 200 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 MRI1Q9BV20 369 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 GEMIN8Q9NWZ8 242 aaKnown RBP7.17□□□□□ -1.26
DENND4A-204ENST00000562028 FAM30AQ9NZY2 134 aa7.17□□□□□ -1.26
DENND4A-204ENST00000562028 CAPN14A8MX76 684 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 H3BML4 177 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 CYP27B1O15528 508 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 CTNND1O60716 968 aaKnown RBP7.16□□□□□ -1.26
DENND4A-204ENST00000562028 ATP5JP18859 108 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 ACO1P21399 889 aaKnown RBP7.16□□□□□ -1.26
DENND4A-204ENST00000562028 IL12RB1P42701 662 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 HK3P52790 923 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 TLE1Q04724 770 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
DENND4A-204ENST00000562028 DACT2Q5SW24 774 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 DRICH1Q6PGQ1 229 aaPredicted RBP7.16□□□□□ -1.26
DENND4A-204ENST00000562028 GADL1Q6ZQY3 521 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 XYLT1Q86Y38 959 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 PLXDC1Q8IUK5 500 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 GSPT2Q8IYD1 628 aaKnown RBP7.16□□□□□ -1.26
DENND4A-204ENST00000562028 OR52N2Q8NGI0 321 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 ACO2Q99798 780 aaKnown RBP7.16□□□□□ -1.26
DENND4A-204ENST00000562028 C1orf112Q9NSG2 853 aa7.16□□□□□ -1.26
DENND4A-204ENST00000562028 PRR5-ARHGAP8B1AHC4 643 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 KIF3BO15066 747 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 FTLP02792 175 aaPredicted RBP7.15□□□□□ -1.26
DENND4A-204ENST00000562028 MAP2K6P52564 334 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 KHDC1Q4VXA5 237 aaKnown RBP7.15□□□□□ -1.26
DENND4A-204ENST00000562028 LCE3BQ5TA77 95 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 CCDC181Q5TID7 509 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 DENND1CQ8IV53 801 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 ZNF808Q8N4W9 903 aaPredicted RBP7.15□□□□□ -1.26
DENND4A-204ENST00000562028 CAMKK1Q8N5S9 505 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 CHST13Q8NET6 341 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 ZFP28Q8NHY6 868 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
DENND4A-204ENST00000562028 C11orf54Q9H0W9 315 aaPredicted RBP7.15□□□□□ -1.26
DENND4A-204ENST00000562028 DEF6Q9H4E7 631 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 SLC23A1Q9UHI7 598 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 TCAF1Q9Y4C2 921 aa7.15□□□□□ -1.26
DENND4A-204ENST00000562028 VSTM5A8MXK1 200 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 ALDH2P05091 517 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 MALP21145 153 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 SELENOPP49908 381 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 ZNF280AP59817 542 aaPredicted RBP7.14□□□□□ -1.27
DENND4A-204ENST00000562028 CREMQ03060 361 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 NOGQ13253 232 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 ARHGAP29Q52LW3 1261 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
DENND4A-204ENST00000562028 PNPLA7Q6ZV29 1317 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 HTR3DQ70Z44 454 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 ATXN2LQ8WWM7 1075 aaKnown RBP7.14□□□□□ -1.27
DENND4A-204ENST00000562028 TFAP2CQ92754 450 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 CDK5RAP3Q96JB5 506 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 CCDC136Q96JN2 1154 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 FAM167AQ96KS9 214 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 VRK1Q99986 396 aaPredicted RBP7.14□□□□□ -1.27
DENND4A-204ENST00000562028 CPEB1Q9BZB8 566 aaKnown RBP7.14□□□□□ -1.27
DENND4A-204ENST00000562028 PRDM11Q9NQV5 511 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 SMPD4Q9NXE4 827 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 OBP2AQ9NY56 170 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 ST6GALNAC2Q9UJ37 374 aa7.14□□□□□ -1.27
DENND4A-204ENST00000562028 RUVBL1Q9Y265 456 aaKnown RBP7.14□□□□□ -1.27
DENND4A-204ENST00000562028 FTH1P19P0C7X4 201 aa7.13□□□□□ -1.27
DENND4A-204ENST00000562028 MGAT1P26572 445 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms