RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 EP300Q09472 2414 aaPredicted RBP27.81■■■□□ 2.04
NME3-202ENST00000561637 GLUD2P49448 558 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 EFNA5P52803 228 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 CACNB1Q02641 598 aaPredicted RBP27.81■■■□□ 2.04
NME3-202ENST00000561637 TMEM119Q4V9L6 283 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 GLRA4Q5JXX5 417 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 FUT10Q6P4F1 479 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 COLEC11Q9BWP8 271 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 EMILIN2Q9BXX0 1053 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 BACH2Q9BYV9 841 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 ZMYM2Q9UBW7 1377 aa27.81■■■□□ 2.04
NME3-202ENST00000561637 VPS37CA5D8V6 355 aaPredicted RBP27.8■■■□□ 2.04
NME3-202ENST00000561637 SLC16A4O15374 487 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 KIF4AO95239 1232 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 TDGQ13569 410 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 CABP7Q86V35 215 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 DTWD2Q8NBA8 298 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 ADPGKQ9BRR6 497 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 TARS2Q9BW92 718 aaKnown RBP27.8■■■□□ 2.04
NME3-202ENST00000561637 ARHGAP28Q9P2N2 729 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 ADAM28Q9UKQ2 775 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 TRIP11Q15643 1979 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 DNAH14Q0VDD8 3507 aa27.8■■■□□ 2.04
NME3-202ENST00000561637 PHLPP2Q6ZVD8 1323 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 K7ERI5 159 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 RPL17P18621 184 aaKnown RBP27.79■■■□□ 2.04
NME3-202ENST00000561637 SLC12A3P55017 1021 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 DSG1Q02413 1049 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 TUSC3Q13454 348 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 HSP90AA2PQ14568 343 aaPredicted RBP27.79■■■□□ 2.04
NME3-202ENST00000561637 GPR149Q86SP6 731 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 GLYCTKQ8IVS8 523 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 ACO2Q99798 780 aaKnown RBP27.79■■■□□ 2.04
NME3-202ENST00000561637 CDT1Q9H211 546 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 KMT5AQ9NQR1 393 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 CHST7Q9NS84 486 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 FOXD4L1Q9NU39 408 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 DUSP12Q9UNI6 340 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 FRYLO94915 3013 aa27.79■■■□□ 2.04
NME3-202ENST00000561637 PLA2G4BP0C869 781 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 SPATA31D3P0C874 917 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 GUCY2CP25092 1073 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 OSTNP61366 133 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 DMP1Q13316 513 aaPredicted RBP27.78■■■□□ 2.04
NME3-202ENST00000561637 DCAF4L1Q3SXM0 396 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 ARL6IP4Q66PJ3 421 aaKnown RBP27.78■■■□□ 2.04
NME3-202ENST00000561637 SPATA31D4Q6ZUB0 917 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 SIX5Q8N196 739 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 SYT2Q8N9I0 419 aaPredicted RBP27.78■■■□□ 2.04
NME3-202ENST00000561637 ACSF2Q96CM8 615 aaPredicted RBP27.78■■■□□ 2.04
NME3-202ENST00000561637 KCNK12Q9HB15 430 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 RXFP1Q9HBX9 757 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 PTPRHQ9HD43 1115 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 TNFSF13BQ9Y275 285 aa27.78■■■□□ 2.04
NME3-202ENST00000561637 ABLIM1O14639 778 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 NARSO43776 548 aaKnown RBP27.77■■■□□ 2.04
NME3-202ENST00000561637 NR1I2O75469 434 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 ARSHQ5FYA8 562 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 RTP2Q5QGT7 225 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 FAM173BQ6P4H8 233 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 PRSS55Q6UWB4 352 aaPredicted RBP27.77■■■□□ 2.04
NME3-202ENST00000561637 CCDC149Q6ZUS6 474 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 PPFIBP1Q86W92 1011 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 RIN2Q8WYP3 895 aaPredicted RBP27.77■■■□□ 2.04
NME3-202ENST00000561637 ZBTB45Q96K62 511 aaPredicted RBP27.77■■■□□ 2.04
NME3-202ENST00000561637 DRC1Q96MC2 740 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 MAN1C1Q9NR34 630 aa27.77■■■□□ 2.04
NME3-202ENST00000561637 MEFVO15553 781 aaPredicted RBP27.76■■■□□ 2.03
NME3-202ENST00000561637 TADA2AO75478 443 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 THP07101 528 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 SF3A1Q15459 793 aaKnown RBP27.76■■■□□ 2.03
NME3-202ENST00000561637 OTOP3Q7RTS5 596 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 CDK5RAP3Q96JB5 506 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 RTP3Q9BQQ7 232 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 TMEM134Q9H6X4 195 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 SFXN1Q9H9B4 322 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 GOLGA2P5Q9HBQ8 144 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 STK39Q9UEW8 545 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 FBXL21Q9UKT6 434 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 CLIC4Q9Y696 253 aa27.76■■■□□ 2.03
NME3-202ENST00000561637 HARSP12081 509 aaKnown RBP27.75■■■□□ 2.03
NME3-202ENST00000561637 ZNF568Q3ZCX4 644 aa27.75■■■□□ 2.03
NME3-202ENST00000561637 BRAPQ7Z569 592 aa27.75■■■□□ 2.03
NME3-202ENST00000561637 PALB2Q86YC2 1186 aa27.75■■■□□ 2.03
NME3-202ENST00000561637 RMDN1Q96DB5 314 aa27.75■■■□□ 2.03
NME3-202ENST00000561637 BLOC1S4Q9NUP1 217 aa27.75■■■□□ 2.03
NME3-202ENST00000561637 DOCK8Q8NF50 2099 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 MYH11P35749 1972 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 SPDYE4A6NLX3 237 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 N4BP1O75113 896 aaKnown RBP27.74■■■□□ 2.03
NME3-202ENST00000561637 RFPL2O75678 378 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 ADH1AP07327 375 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 DHX8Q14562 1220 aaKnown RBP27.74■■■□□ 2.03
NME3-202ENST00000561637 KARSQ15046 597 aaKnown RBP27.74■■■□□ 2.03
NME3-202ENST00000561637 USP41Q3LFD5 358 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 USP49Q70CQ1 688 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 TMEM130Q8N3G9 435 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 TMEM161BQ8NDZ6 487 aa27.74■■■□□ 2.03
NME3-202ENST00000561637 PPP1R10Q96QC0 940 aaKnown RBP27.74■■■□□ 2.03
NME3-202ENST00000561637 MRPL4Q9BYD3 311 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms