RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TCERG1LQ5VWI1 586 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 E4F1Q66K89 784 aaPredicted RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 INTS8Q75QN2 995 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 SPRED2Q7Z698 418 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 TLK2Q86UE8 772 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 CCAR2Q8N163 923 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 LINC01465Q8N7H1 131 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 SLC43A3Q8NBI5 491 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 NEK11Q8NG66 645 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 OR8K1Q8NGG5 319 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 TRAPPC12Q8WVT3 735 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 PRPF31Q8WWY3 499 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 PSPC1Q8WXF1 523 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 VWCEQ96DN2 955 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 SCLYQ96I15 445 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 SLC9A7Q96T83 725 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 C16orf70Q9BSU1 422 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 LSM14BQ9BX40 385 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 EDEM3Q9BZQ6 932 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 RNPEPQ9H4A4 650 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 PCIF1Q9H4Z3 704 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 MMRN2Q9H8L6 949 aa8.18□□□□□ -1.1
TPM1-231ENST00000561395 FAM207AQ9NSI2 230 aaPredicted RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 GNEQ9Y223 722 aaKnown RBP8.18□□□□□ -1.1
TPM1-231ENST00000561395 A6NJR5 290 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 USP27XA6NNY8 438 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 H3BRB1 525 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 MAGEB2O15479 319 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 B4GALT4O60513 344 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 NOL4O94818 638 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 ADRB2P07550 413 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 PFKMP08237 780 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 TRIM49P0CI25 452 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 TRIM49CP0CI26 452 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 KRT13P13646 458 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 INSRRP14616 1297 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 FMO5P49326 533 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 EFNA5P52803 228 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
TPM1-231ENST00000561395 BEX3Q00994 111 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 FOXK2Q01167 660 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 STRN3Q13033 797 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 MEA1Q16626 185 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 LEXMQ3ZCV2 418 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 WDR59Q6PJI9 974 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 CYP26C1Q6V0L0 522 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 GBP6Q6ZN66 633 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 TMTC1Q8IUR5 882 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 LRRC71Q8N4P6 559 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 ZSWIM2Q8NEG5 633 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 ZNF397Q8NF99 534 aaPredicted RBP8.17□□□□□ -1.1
TPM1-231ENST00000561395 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.17□□□□□ -1.1
TPM1-231ENST00000561395 GDPD5Q8WTR4 605 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 POMGNT1Q8WZA1 660 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 BAP1Q92560 729 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 BICD1Q96G01 975 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 CRACR2AQ9BSW2 395 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 CCDC113Q9H0I3 377 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 TRPV6Q9H1D0 765 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 GANQ9H2C0 597 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 TUT1Q9H6E5 874 aaKnown RBP8.17□□□□□ -1.1
TPM1-231ENST00000561395 TMEM134Q9H6X4 195 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 SUGCTQ9HAC7 445 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 PLCB1Q9NQ66 1216 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 AGPAT5Q9NUQ2 364 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 GCNT4Q9P109 453 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 CEP72Q9P209 647 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 SUCLA2Q9P2R7 463 aaPredicted RBP8.17□□□□□ -1.1
TPM1-231ENST00000561395 Q9Y3F1 56 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 STYXL1Q9Y6J8 313 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 KAT6AQ92794 2004 aa8.17□□□□□ -1.1
TPM1-231ENST00000561395 SOWAHDA6NJG2 315 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 K7ERI5 159 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 ASAP2O43150 1006 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 DYNC1LI2O43237 492 aaPredicted RBP8.16□□□□□ -1.1
TPM1-231ENST00000561395 CCP110O43303 1012 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 F2P00734 622 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 EDN1P05305 212 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 KCNA5P22460 613 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 HNRNPH3P31942 346 aaKnown RBP8.16□□□□□ -1.1
TPM1-231ENST00000561395 LIG4P49917 911 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 CLCN3P51790 818 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 VAMP7P51809 220 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 IGBP1P78318 339 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 MYL7Q01449 175 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 ENPEPQ07075 957 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 PPFIA1Q13136 1202 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 ITGA7Q13683 1181 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 TFDP1Q14186 410 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 HSP90AA2PQ14568 343 aaPredicted RBP8.16□□□□□ -1.1
TPM1-231ENST00000561395 MTF1Q14872 753 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 GRIK4Q16099 956 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 SNRNP35Q16560 246 aaKnown RBP8.16□□□□□ -1.1
TPM1-231ENST00000561395 EXOC3L4Q17RC7 722 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
TPM1-231ENST00000561395 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
TPM1-231ENST00000561395 PTCRAQ6ISU1 281 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms