RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 CYP4F3Q08477 520 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 DMWDQ09019 674 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 LONRF2Q1L5Z9 754 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 SPATS1Q496A3 300 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 TIGD5Q53EQ6 642 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 HLA-DQA1Q5Y7H0 255 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 DENND5AQ6IQ26 1287 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 RCSD1Q6JBY9 416 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 APOBEC3HQ6NTF7 200 aaKnown RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 RNF180Q86T96 592 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 DPP9Q86TI2 863 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 SIRT2Q8IXJ6 389 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 RPUSD2Q8IZ73 545 aaKnown RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 FAM9BQ8IZU0 186 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 TMEM52Q8NDY8 209 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 TTLL11Q8NHH1 800 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 APPBP2Q92624 585 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 TEKT1Q969V4 418 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 MAP6Q96JE9 813 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 BDH2Q9BUT1 245 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 ADAM7Q9H2U9 754 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 ZNF552Q9H707 407 aaPredicted RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 XPNPEP3Q9NQH7 507 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 TNFRSF10DQ9UBN6 386 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 TMEFF2Q9UIK5 374 aaPredicted RBP3.94□□□□□ -1.78
SPG11-225ENST00000561391 UMODL1Q5DID0 1318 aa3.94□□□□□ -1.78
SPG11-225ENST00000561391 MYO15AQ9UKN7 3530 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 OR14I1A6ND48 311 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 SLC15A5A6NIM6 579 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 CTNND1O60716 968 aaKnown RBP3.93□□□□□ -1.78
SPG11-225ENST00000561391 LMNAP02545 664 aaKnown RBP3.93□□□□□ -1.78
SPG11-225ENST00000561391 CAPNS1P04632 268 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 PCCAP05165 728 aaPredicted RBP3.93□□□□□ -1.78
SPG11-225ENST00000561391 SCG5P05408 212 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 LCP1P13796 627 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 INSRRP14616 1297 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 CDK7P50613 346 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 GALK1P51570 392 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 ACLYP53396 1101 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 HERVK_113P62684 666 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 SUMO1P63165 101 aaKnown RBP3.93□□□□□ -1.78
SPG11-225ENST00000561391 SIGLEC14Q08ET2 396 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 MAP4K2Q12851 820 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 CHAF1AQ13111 956 aaPredicted RBP3.93□□□□□ -1.78
SPG11-225ENST00000561391 CBX2Q14781 532 aaPredicted RBP3.93□□□□□ -1.78
SPG11-225ENST00000561391 KIR3DS1Q14943 382 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 SLC35F1Q5T1Q4 408 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 ADGRF1Q5T601 910 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 FKBP1CQ5VVH2 108 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 KCNT2Q6UVM3 1135 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 CYP2R1Q6VVX0 501 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 DEFB128Q7Z7B8 93 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 SPPL2CQ8IUH8 684 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 CCDC103Q8IW40 242 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 TMEM105Q8N8V8 129 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 KREMEN2Q8NCW0 462 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 PANK1Q8TE04 598 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 USP33Q8TEY7 942 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 NUP133Q8WUM0 1156 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 LINC01599Q8WXQ3 324 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 DIO2Q92813 273 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 SCLYQ96I15 445 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 RIPOR3Q96MK2 946 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 MYD88Q99836 296 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 G6PC3Q9BUM1 346 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 TMEM260Q9NX78 707 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 SIRT5Q9NXA8 310 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 CLDND1Q9NY35 253 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 NDOR1Q9UHB4 597 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 ZNF281Q9Y2X9 895 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 TRAF6Q9Y4K3 522 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 PCDHA2Q9Y5H9 948 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 BRWD1Q9NSI6 2320 aa3.93□□□□□ -1.78
SPG11-225ENST00000561391 DNAH14Q0VDD8 3507 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 TRBV23OR9-2A0A075B6M9 112 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 A0A1W2PQJ5 194 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 LCHNA4D1U4 455 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 FADS2P1A8MWK0 482 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 ARNTLO00327 626 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 MBTPS2O43462 519 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 CLSTN1O94985 981 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 RARBP10826 455 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 HIBADHP31937 336 aaKnown RBP3.92□□□□□ -1.78
SPG11-225ENST00000561391 GYG1P46976 350 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 SRSF3P84103 164 aaKnown RBP3.92□□□□□ -1.78
SPG11-225ENST00000561391 CHRNEQ04844 493 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 NR0B2Q15466 257 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 SMAD2Q15796 467 aaKnown RBP3.92□□□□□ -1.78
SPG11-225ENST00000561391 NTRK3Q16288 839 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 INF2Q27J81 1249 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 VMACQ2NL98 169 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 ZC3H12BQ5HYM0 836 aaKnown RBP3.92□□□□□ -1.78
SPG11-225ENST00000561391 MBLAC2Q68D91 279 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 IQCEQ6IPM2 695 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 CDC42EP5Q6NZY7 148 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 LRSAM1Q6UWE0 723 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 TMCO2Q7Z6W1 182 aaPredicted RBP3.92□□□□□ -1.78
SPG11-225ENST00000561391 ANKS4BQ8N8V4 417 aa3.92□□□□□ -1.78
SPG11-225ENST00000561391 KISS1RQ969F8 398 aaPredicted RBP3.92□□□□□ -1.78
SPG11-225ENST00000561391 PABPC5Q96DU9 382 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms