RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 DPP7Q9UHL4 492 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 MRPS17Q9Y2R5 130 aaKnown RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 F5P12259 2224 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 HECTD1Q9ULT8 2610 aa6.08□□□□□ -1.44
HERC1-213ENST00000561359 USP9XQ93008 2570 aaPredicted RBP6.08□□□□□ -1.44
HERC1-213ENST00000561359 DENND4AQ7Z401 1863 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 SMIM35A0A1B0GVV1 85 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 CHURC1-FNTBB4DL54 471 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 PIK3R2O00459 728 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 ANP32CO43423 234 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 RAB11FIP3O75154 756 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 RFPL2O75678 378 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 ZNF806P0C7X5 589 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 TDGF1P13385 188 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 ZSCAN20P17040 1043 aaPredicted RBP6.07□□□□□ -1.44
HERC1-213ENST00000561359 FNTBP49356 437 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 CCR3P51677 355 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 SFSWAPQ12872 951 aaKnown RBP6.07□□□□□ -1.44
HERC1-213ENST00000561359 PLCB4Q15147 1175 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 CLLU1OSQ5K130 101 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 RNF43Q68DV7 783 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 SYT9Q86SS6 491 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 ECHDC2Q86YB7 292 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 STAG2Q8N3U4 1231 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 SAMD3Q8N6K7 520 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
HERC1-213ENST00000561359 FAM200AQ8TCP9 573 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 SUSD3Q96L08 255 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 TTC14Q96N46 770 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 RHOBTB2Q9BYZ6 727 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 ARRDC1-AS1Q9H2J1 176 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 AZI2Q9H6S1 392 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 JMJD4Q9H9V9 463 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 MRPL17Q9NRX2 175 aaKnown RBP6.07□□□□□ -1.44
HERC1-213ENST00000561359 HCN2Q9UL51 889 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 NDRG2Q9UN36 371 aaKnown RBP6.07□□□□□ -1.44
HERC1-213ENST00000561359 WASF3Q9UPY6 502 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 ZFP37Q9Y6Q3 630 aaPredicted RBP6.07□□□□□ -1.44
HERC1-213ENST00000561359 RALGAPA1Q6GYQ0 2036 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 MIA3Q5JRA6 1907 aa6.07□□□□□ -1.44
HERC1-213ENST00000561359 KALRNO60229 2985 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 GSTTP1A0A1W2PQM5 241 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 CARNS1A5YM72 827 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 HMMRO75330 724 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 GLUD1P00367 558 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 ALAS2P22557 587 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 CNR2P34972 360 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 AK2P54819 239 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 GHRHRQ02643 423 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 RNASELQ05823 741 aaKnown RBP6.06□□□□□ -1.44
HERC1-213ENST00000561359 C19orf57Q0VDD7 668 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 DSC3Q14574 896 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 KIZQ2M2Z5 673 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 COL28A1Q2UY09 1125 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 ASPRV1Q53RT3 343 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 HEATR6Q6AI08 1181 aaKnown RBP6.06□□□□□ -1.44
HERC1-213ENST00000561359 KIAA1211LQ6NV74 962 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 MTHFD1LQ6UB35 978 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 CHSY3Q70JA7 882 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 MTSS1LQ765P7 747 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 NLRX1Q86UT6 975 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 FAM228AQ86W67 206 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 GLIS3Q8NEA6 775 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 BCL7CQ8WUZ0 217 aaPredicted RBP6.06□□□□□ -1.44
HERC1-213ENST00000561359 ZNF707Q96C28 371 aaPredicted RBP6.06□□□□□ -1.44
HERC1-213ENST00000561359 BBC3Q96PG8 261 aaPredicted RBP6.06□□□□□ -1.44
HERC1-213ENST00000561359 OSMRQ99650 979 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 ZMYND15Q9H091 742 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 GBP3Q9H0R5 595 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 CHRDQ9H2X0 955 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 KLF15Q9UIH9 416 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 ANAPC4Q9UJX5 808 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 ZNF462Q96JM2 2506 aa6.06□□□□□ -1.44
HERC1-213ENST00000561359 DOCK8Q8NF50 2099 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 COL4A3Q01955 1670 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 ATP9AO75110 1047 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 URODP06132 367 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 GALTP07902 379 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 FGRP09769 529 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 PARP1P09874 1014 aaKnown RBP6.05□□□□□ -1.44
HERC1-213ENST00000561359 SPATA31D3P0C874 917 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 KLRC1P26715 233 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 CXCL12P48061 93 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 CRYBB1P53674 252 aaPredicted RBP6.05□□□□□ -1.44
HERC1-213ENST00000561359 SATB1Q01826 763 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 FZD5Q13467 585 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 DAB2IPQ5VWQ8 1189 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 SPATA31D4Q6ZUB0 917 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 KIAA0319LQ8IZA0 1049 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 SLC30A3Q99726 388 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 KXD1Q9BQD3 176 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 ZKSCAN3Q9BRR0 538 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 MKNK1Q9BUB5 465 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 PHF20Q9BVI0 1012 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 VN1R3Q9BXE9 311 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 NT5C3AQ9H0P0 336 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 ADAMTS10Q9H324 1103 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 SMOC1Q9H4F8 434 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 KAT14Q9H8E8 782 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 HEBP1Q9NRV9 189 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms