RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ESPNB1AK53 854 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 ARHGAP6O43182 974 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 FAM189A1O60320 539 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP3-219ENST00000561326 SGPL1O95470 568 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 NPTXRO95502 500 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 CHRNA1P02708 482 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 UCHL3P15374 230 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 ZSCAN20P17040 1043 aaPredicted RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 HOXA11P31270 313 aaPredicted RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 TNFSF9P41273 254 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 GRM5P41594 1212 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 CDK7P50613 346 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 OSTNP61366 133 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 LRMPQ12912 555 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 BIRC3Q13489 604 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 BFSP2Q13515 415 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 EPC2Q52LR7 807 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 SEZ6Q53EL9 994 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 FAM26DQ5JW98 314 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 SFMBT2Q5VUG0 894 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 SV2AQ7L0J3 742 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 CDR2LQ86X02 465 aaPredicted RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 NT5DC4Q86YG4 428 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 CAGE1Q8TC20 777 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 STK33Q9BYT3 514 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 SENP6Q9GZR1 1112 aaPredicted RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 TRPV6Q9H1D0 765 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 PLEKHA5Q9HAU0 1116 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 TOPORSQ9NS56 1045 aaPredicted RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 TRMT13Q9NUP7 481 aaKnown RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 RAB20Q9NX57 234 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 APEX2Q9UBZ4 518 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 ST3GAL5Q9UNP4 418 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 NOC2LQ9Y3T9 749 aaKnown RBP11.14□□□□□ -0.63
USP3-219ENST00000561326 RALGAPA2Q2PPJ7 1873 aa11.14□□□□□ -0.63
USP3-219ENST00000561326 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 CENPFP49454 3210 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 CCP110O43303 1012 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 NOL4O94818 638 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 C4BPAP04003 597 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 CTSHP09668 335 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 TMEM191BP0C7N4 346 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 ACTN1P12814 892 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 KCNJ6P48051 423 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 MFAP3P55082 362 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 CCZ1BP86790 482 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 CCZ1P86791 482 aaPredicted RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 CDK17Q00537 523 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 GOLGA8FQ08AF8 430 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 GOLGA8DPQ0D2H9 430 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 NFX1Q12986 1120 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 ENOX2Q16206 610 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 ZACNQ401N2 412 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 ZBTB41Q5SVQ8 909 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 TWF2Q6IBS0 349 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 C15orf39Q6ZRI6 1047 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 ENOSF1Q7L5Y1 443 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 TMEM40Q8WWA1 233 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 ARMC5Q96C12 935 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 ZNF333Q96JL9 665 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 NT5C1BQ96P26 610 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 IMPG2Q9BZV3 1241 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 GANQ9H2C0 597 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 UBE2TQ9NPD8 197 aaPredicted RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 BZW2Q9Y6E2 419 aaKnown RBP11.13□□□□□ -0.63
USP3-219ENST00000561326 CEP350Q5VT06 3117 aa11.13□□□□□ -0.63
USP3-219ENST00000561326 LACTBL1A8MY62 500 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 DCDC2CA8MYV0 355 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
USP3-219ENST00000561326 XPOTO43592 962 aaKnown RBP11.12□□□□□ -0.63
USP3-219ENST00000561326 IPO7O95373 1038 aaKnown RBP11.12□□□□□ -0.63
USP3-219ENST00000561326 HLA-DRAP01903 254 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 CXCL8P10145 99 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 CKBP12277 381 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 SKIP12755 728 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 FECHP22830 423 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 STAT1P42224 750 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 PIK3CAP42336 1068 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
USP3-219ENST00000561326 MGAT3Q09327 533 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 PAK2Q13177 524 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 TRPC3Q13507 836 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 NCOA4Q13772 614 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 TRIM71Q2Q1W2 868 aaKnown RBP11.12□□□□□ -0.63
USP3-219ENST00000561326 FBXO47Q5MNV8 452 aa11.12□□□□□ -0.63
USP3-219ENST00000561326 PDXDC1Q6P996 788 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms