RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 BTBD8Q5XKL5 378 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 CPZQ66K79 652 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 USP50Q70EL3 339 aaPredicted RBP7.15□□□□□ -1.26
LRRC28-220ENST00000561253 FKBP9P1Q75LS8 142 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 NOSTRINQ8IVI9 506 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 ARRDC4Q8NCT1 418 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 CLEC4DQ8WXI8 215 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 PRMT6Q96LA8 375 aaPredicted RBP7.15□□□□□ -1.26
LRRC28-220ENST00000561253 DIRC2Q96SL1 478 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 EPB41L4BQ9H329 900 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 PCIF1Q9H4Z3 704 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 NSUN3Q9H649 340 aaKnown RBP7.15□□□□□ -1.26
LRRC28-220ENST00000561253 BCAS3Q9H6U6 928 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 DCP1AQ9NPI6 582 aaPredicted RBP7.15□□□□□ -1.26
LRRC28-220ENST00000561253 RIC8BQ9NVN3 520 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 FAM53CQ9NYF3 392 aa7.15□□□□□ -1.26
LRRC28-220ENST00000561253 DOCK2Q92608 1830 aa7.15□□□□□ -1.27
LRRC28-220ENST00000561253 GPR75-ASB3A0A0A6YYF3 556 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 GOLIM4O00461 696 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 NEMP1O14524 444 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 FRAT2O75474 233 aaPredicted RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 EYA4O95677 639 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 ZBTB48P10074 688 aaPredicted RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 BPIP17213 487 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 PTPN1P18031 435 aaKnown RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 ADCYAP1R1P41586 468 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 LSSP48449 732 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 ZNF200P98182 395 aaPredicted RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 TMED8Q6PL24 325 aaPredicted RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 ZGPATQ8N5A5 531 aaKnown RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 KBTBD3Q8NAB2 608 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 PAG1Q9NWQ8 432 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 OXSMQ9NWU1 459 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 SIRT5Q9NXA8 310 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 APOBEC2Q9Y235 224 aaKnown RBP7.14□□□□□ -1.27
LRRC28-220ENST00000561253 TELO2Q9Y4R8 837 aa7.14□□□□□ -1.27
LRRC28-220ENST00000561253 MYO5AQ9Y4I1 1855 aaKnown RBP7.13□□□□□ -1.27
LRRC28-220ENST00000561253 CNTNAP1P78357 1384 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 MROH7-TTC4A0A0A0MT08 1334 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 MAST3O60307 1309 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 PASKQ96RG2 1323 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 TAL1P17542 331 aaPredicted RBP7.13□□□□□ -1.27
LRRC28-220ENST00000561253 ADD2P35612 726 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 KIF11P52732 1056 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 STAT4Q14765 748 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 TMEM132BQ14DG7 1078 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 FSTL4Q6MZW2 842 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 ETV3LQ6ZN32 361 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 PRR23BQ6ZRT6 265 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 PNMA8AQ86V59 439 aaPredicted RBP7.13□□□□□ -1.27
LRRC28-220ENST00000561253 LDHDQ86WU2 507 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 PASD1Q8IV76 773 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 FAM126BQ8IXS8 530 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 EFHBQ8N7U6 833 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 KIAA1958Q8N8K9 716 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 PRPF38AQ8NAV1 312 aaKnown RBP7.13□□□□□ -1.27
LRRC28-220ENST00000561253 DDX11Q96FC9 970 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 CCDC136Q96JN2 1154 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 RIOK1Q9BRS2 568 aaKnown RBP7.13□□□□□ -1.27
LRRC28-220ENST00000561253 KCNH7Q9NS40 1196 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 DTLQ9NZJ0 730 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 H2AFY2Q9P0M6 372 aaPredicted RBP7.13□□□□□ -1.27
LRRC28-220ENST00000561253 ABCF2Q9UG63 623 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 B3GALT1Q9Y5Z6 326 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 MYH13Q9UKX3 1938 aa7.13□□□□□ -1.27
LRRC28-220ENST00000561253 SSC5DA1L4H1 1573 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 ATRNL1Q5VV63 1379 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 PRAMEF25A6NGN4 478 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 LRRC10BA6NIK2 292 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 FAM90A27PA6NNH2 459 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 ERC2O15083 957 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 FOXP2O15409 715 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 BUB1BO60566 1050 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 WDHD1O75717 1129 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TOMM70O94826 608 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 PMLP29590 882 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 ID4P47928 161 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 CDKN1CP49918 316 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TMPRSS15P98073 1019 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TTF1Q15361 905 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 UBE3CQ15386 1083 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 DLGAP5Q15398 846 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 MLANAQ16655 118 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 ATP13A4Q4VNC1 1196 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 PAN2Q504Q3 1202 aaKnown RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TTC22Q5TAA0 569 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 FKBP1CQ5VVH2 108 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 RNF219Q5W0B1 726 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 SPTY2D1Q68D10 685 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 CDC42EP5Q6NZY7 148 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 DLK2Q6UY11 383 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TICAM2Q86XR7 235 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 DLG3Q92796 817 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TEKT1Q969V4 418 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TOE1Q96GM8 510 aaKnown RBP7.12□□□□□ -1.27
LRRC28-220ENST00000561253 SCYL1Q96KG9 808 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 IDI2Q9BXS1 227 aa7.12□□□□□ -1.27
LRRC28-220ENST00000561253 DDX4Q9NQI0 724 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms