RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SGSM2O43147 1006 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 GLRX3O76003 335 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 CD4P01730 458 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 NTRK1P04629 796 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 CAPNS1P04632 268 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 THBDP07204 575 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 ATP2A2P16615 1042 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 AVPR2P30518 371 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 THBS2P35442 1172 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 NBL1P41271 181 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 SARSP49591 514 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 ACLYP53396 1101 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 VCPP55072 806 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 IFIT5Q13325 482 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 ACAP1Q15027 740 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 INF2Q27J81 1249 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 UBXN11Q5T124 520 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 POMZP3Q6PJE2 187 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 LDHAL6AQ6ZMR3 332 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 DGLUCYQ7Z3D6 616 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 RNF180Q86T96 592 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 FERMT3Q86UX7 667 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 ADHFE1Q8IWW8 467 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 CRACR2BQ8N4Y2 399 aaPredicted RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 ADAMTS17Q8TE56 1095 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 FRS2Q8WU20 508 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 C11orf84Q9BUA3 381 aaPredicted RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 OSBPL5Q9H0X9 879 aaPredicted RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 MTIF3Q9H2K0 278 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 GPRC5CQ9NQ84 441 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 DDX4Q9NQI0 724 aaKnown RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 STARD7Q9NQZ5 370 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 CYP26B1Q9NR63 512 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 BTBD7Q9P203 1132 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 KIAA1522Q9P206 1035 aaPredicted RBP4.7□□□□□ -1.66
HERC1-211ENST00000560983 PRKAG3Q9UGI9 489 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 SIT1Q9Y3P8 196 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 RABGAP1Q9Y3P9 1069 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 UMODL1Q5DID0 1318 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 PLXNA1Q9UIW2 1896 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 H3BQ06 376 aaPredicted RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 K7ESM1 405 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 KCNH1O95259 989 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 DDX58O95786 925 aaKnown RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 FUCA1P04066 466 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 SCG5P05408 212 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 RARBP10826 455 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 NAT2P11245 290 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 RPL13P26373 211 aaKnown RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 CNR2P34972 360 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 TMPOP42166 694 aaKnown RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 GJA9P57773 515 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 NCAPHQ15003 741 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 FAM26FQ5R3K3 315 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 E4F1Q66K89 784 aaPredicted RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 GTF2IRD2BQ6EKJ0 949 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 DPP9Q86TI2 863 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 GTF2IRD2Q86UP8 949 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 FAM126BQ8IXS8 530 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 ADSSL1Q8N142 457 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 KYQ8NBH2 561 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 NUP133Q8WUM0 1156 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 ZBTB8AQ96BR9 441 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 SSBP3Q9BWW4 388 aaPredicted RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 PUS3Q9BZE2 481 aaKnown RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 UPF3BQ9BZI7 483 aaKnown RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 TGIF2Q9GZN2 237 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 CNNM1Q9NRU3 951 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 MYRFQ9Y2G1 1151 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 LAS1LQ9Y4W2 734 aaKnown RBP4.69□□□□□ -1.66
HERC1-211ENST00000560983 X6R8D5 127 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 MAST3O60307 1309 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 ELP1O95163 1332 aa4.69□□□□□ -1.66
HERC1-211ENST00000560983 MYO9BQ13459 2157 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 RFX7Q2KHR2 1363 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 RIF1Q5UIP0 2472 aaKnown RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 CACNA1HO95180 2353 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 MYADML2A6NDP7 307 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 C19orf81C9J6K1 198 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 ARVCFO00192 962 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 ELL2O00472 640 aaPredicted RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 STRNO43815 780 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 FRAT2O75474 233 aaPredicted RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 ADORA2AP29274 412 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 PRDX5P30044 214 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 CCL23P55773 120 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 CCNA1P78396 465 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 ADAM17P78536 824 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 PPP2R5EQ16537 467 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 ST3GAL2Q16842 350 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 ZXDCQ2QGD7 858 aaPredicted RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 WDR78Q5VTH9 848 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 LMBR1LQ6UX01 489 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 ETV3LQ6ZN32 361 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 VPS37DQ86XT2 251 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 SUGP1Q8IWZ8 645 aaKnown RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 TTC9BQ8N6N2 239 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 KREMEN2Q8NCW0 462 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 SEC14L1Q92503 715 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms