RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 RNF208Q9H0X6 261 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 C2orf40Q9H1Z8 148 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 NHEJ1Q9H9Q4 299 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 APOBEC3GQ9HC16 384 aaKnown RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 SNTG2Q9NY99 539 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 KLK14Q9P0G3 267 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 CACNG4Q9UBN1 327 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 DNAJC12Q9UKB3 198 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 PLAGL2Q9UPG8 496 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 CDY2AQ9Y6F7 541 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 KIAA0100Q14667 2235 aaKnown RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 A0A1W2PQ45 241 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 A0A1W2PQY0 241 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 H0YCG3 227 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 OGTO15294 1046 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 STX10O60499 249 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 B4GALT4O60513 344 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 NPTXRO95502 500 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 SSTR3P32745 418 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 THPOP40225 353 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 MNX1P50219 401 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 ATN1P54259 1190 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 SNRPFP62306 86 aaKnown RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 CLDN10P78369 228 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 MYL7Q01449 175 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 NFX1Q12986 1120 aaKnown RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 MBTPS1Q14703 1052 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 DRAP1Q14919 205 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 PSMD6Q15008 389 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 UBXN11Q5T124 520 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 SLFN12LQ6IEE8 588 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 PDXDC1Q6P996 788 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 CATSPER4Q7RTX7 472 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 RNF180Q86T96 592 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 FAM228AQ86W67 206 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 CNGA4Q8IV77 575 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 SLAIN1Q8ND83 568 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 OLIG1Q8TAK6 271 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 MTMR12Q9C0I1 747 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 NXF3Q9H4D5 531 aaKnown RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 PRMT7Q9NVM4 692 aaPredicted RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 CGNQ9P2M7 1197 aaKnown RBP8.06□□□□□ -1.12
IDH3A-220ENST00000560667 TRIP11Q15643 1979 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 SIP14410 1827 aa8.06□□□□□ -1.12
IDH3A-220ENST00000560667 A0A1W2PQJ5 194 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ZNF500O60304 480 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ZEB2O60315 1214 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 MGEA5O60502 916 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 GFPT2O94808 682 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 GNRH1P01148 92 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 NFICP08651 508 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 CCL5P13501 91 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 FECHP22830 423 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 CST5P28325 142 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 EIF4A3P38919 411 aaKnown RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 MXI1P50539 228 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 TFAMQ00059 246 aaKnown RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 PTK2Q05397 1052 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 GFPT1Q06210 699 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 MEA1Q16626 185 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 FAM187BQ17R55 369 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ZACNQ401N2 412 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 GLRA4Q5JXX5 417 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ZNF618Q5T7W0 954 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 KRT39Q6A163 491 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ZNF571Q7Z3V5 609 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 PALB2Q86YC2 1186 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 HELQQ8TDG4 1101 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 DIS3LQ8TF46 1054 aaKnown RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 RABGGTAQ92696 567 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 C16orf45Q96MC5 204 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 NUP58Q9BVL2 599 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 KATNAL1Q9BW62 490 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 GCOM2Q9BZD3 368 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 HAUS4Q9H6D7 363 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 PLCB1Q9NQ66 1216 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 RAB20Q9NX57 234 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 CEP72Q9P209 647 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 KCNG1Q9UIX4 513 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ST3GAL5Q9UNP4 418 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 NUB1Q9Y5A7 615 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 EPN1Q9Y6I3 576 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 PPEF2O14830 753 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 MAPK13O15264 365 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ERLIN2O94905 339 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 HLA-DRAP01903 254 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 CFHP08603 1231 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 CD52P31358 61 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 CRYBB1P53674 252 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 JAM2P57087 298 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 MYL6P60660 151 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 GPNMBQ14956 572 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 TRIM71Q2Q1W2 868 aaKnown RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 ASTE1Q2TB18 679 aaPredicted RBP8.05□□□□□ -1.12
IDH3A-220ENST00000560667 SLC9C1Q4G0N8 1177 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 JADE1Q6IE81 842 aa8.05□□□□□ -1.12
IDH3A-220ENST00000560667 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms