RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	PDZD4	Q76G19	769 aa	Predicted RBP	5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	FUBP1	Q96AE4	644 aa	Known RBP	5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	PTCD3	Q96EY7	689 aa	Known RBP	5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	KANSL2	Q9H9L4	492 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	GALNT9	Q9HCQ5	603 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	KCTD5	Q9NXV2	234 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	EVL	Q9UI08	416 aa	Predicted RBP	5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	PRSS38	A1L453	326 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	TRIM38	O00635	465 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	KPNA6	O60684	536 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	GAS7	O60861	476 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	TMEM127	O75204	238 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	BMP15	O95972	392 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	FGFR4	P22455	802 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	CLRN1	P58418	232 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	LRRC32	Q14392	662 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	PASD1	Q8IV76	773 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	CHTF18	Q8WVB6	975 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	THG1L	Q9NWX6	298 aa	Known RBP	5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	DMTF1	Q9Y222	760 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	AATK	Q6ZMQ8	1374 aa		5.15	□□□□□ -1.59
SLTM-223	ENST00000560532	CCDC78	A2IDD5	438 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	ZNF891	A8MT65	544 aa	Predicted RBP	5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	CXorf49	A8MYA2	514 aa	Predicted RBP	5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	ADCY6	O43306	1168 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	ASMTL	O95671	621 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	F2	P00734	622 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	IGKV2-30	P06310	120 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	FLT3LG	P49771	235 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	HSD11B2	P80365	405 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	NFE2L2	Q16236	605 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	EFHB	Q8N7U6	833 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	HASPIN	Q8TF76	798 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	SNX33	Q8WV41	574 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	NACC2	Q96BF6	587 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	REXO4	Q9GZR2	422 aa	Known RBP	5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	RNPEP	Q9H4A4	650 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	TMEM74B	Q9NUR3	256 aa		5.14	□□□□□ -1.59
SLTM-223	ENST00000560532	TP73	O15350	636 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	TGM5	O43548	720 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	GPD1	P21695	349 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	ITPKB	P27987	946 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	NEK4	P51957	841 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	BMS1	Q14692	1282 aa	Known RBP	5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	KIAA1614	Q5VZ46	1190 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	REPS2	Q8NFH8	660 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	SARAF	Q96BY9	339 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	BOD1	Q96IK1	185 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	MS4A5	Q9H3V2	200 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	CNTNAP2	Q9UHC6	1331 aa		5.13	□□□□□ -1.59
SLTM-223	ENST00000560532	PJA2	O43164	708 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	RFPL3	O75679	317 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	GPANK1	O95872	356 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	PTPN7	P35236	360 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	DSG1	Q02413	1049 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	CCDC144B	Q3MJ40	725 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	KLHL22	Q53GT1	634 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	C19orf54	Q5BKX5	351 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	TSTD2	Q5T7W7	516 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	FAM43A	Q8N2R8	423 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	SH3TC2	Q8TF17	1288 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	FCRL4	Q96PJ5	515 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	ORAI3	Q9BRQ5	295 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	UNKL	Q9H9P5	680 aa	Known RBP	5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	USP25	Q9UHP3	1055 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	PRSS50	Q9UI38	385 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	PPP2R3B	Q9Y5P8	575 aa		5.12	□□□□□ -1.59
SLTM-223	ENST00000560532	PEX1	O43933	1283 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	GAST	P01350	101 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	SNRPA1	P09661	255 aa	Known RBP	5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	CTSS	P25774	331 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	KPNA1	P52294	538 aa	Predicted RBP	5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	MEF2A	Q02078	507 aa	Predicted RBP	5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	CYP2A13	Q16696	494 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	C21orf62-AS1	Q17RA5	79 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	MTX3	Q5HYI7	312 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	AMIGO2	Q86SJ2	522 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	KIF18B	Q86Y91	864 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	THNSL2	Q86YJ6	484 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	VGLL2	Q8N8G2	317 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	FBXO18	Q8NFZ0	1043 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	SSH3	Q8TE77	659 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	ZNF480	Q8WV37	535 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	ANO3	Q9BYT9	981 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	PIF1	Q9H611	641 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	ZSWIM4	Q9H7M6	989 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	KCNE5	Q9UJ90	142 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	TMPRSS11E	Q9UL52	423 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	MTO1	Q9Y2Z2	717 aa	Known RBP	5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	PNPLA7	Q6ZV29	1317 aa		5.11	□□□□□ -1.59
SLTM-223	ENST00000560532	ZNF804B	A4D1E1	1349 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	PRKCG	P05129	697 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	PTGER1	P34995	402 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	VAV2	P52735	878 aa		5.1	□□□□□ -1.59
SLTM-223	ENST00000560532	FHL1	Q13642	323 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms