RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CENPQQ7L2Z9 268 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 CDR2LQ86X02 465 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 IFNLR1Q8IU57 520 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 TPH2Q8IWU9 490 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 DAGLBQ8NCG7 672 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 NETO1Q8TDF5 533 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 DYDC2Q96IM9 177 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 PAAF1Q9BRP4 392 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 HEBP1Q9NRV9 189 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 HCFC1R1Q9NWW0 138 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 RGL1Q9NZL6 768 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 MAP1BP46821 2468 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 KIF4AO95239 1232 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 CYP4A11Q02928 519 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 CAPSQ13938 189 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 LPAL2Q16609 132 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 TMEM132AQ24JP5 1023 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 PPM1JQ5JR12 505 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 LAIR1Q6GTX8 287 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 PPP4R3AQ6IN85 833 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 PRR23BQ6ZRT6 265 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 RTL10Q7L3V2 364 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 FBXL16Q8N461 479 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 CELF5Q8N6W0 485 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 MCRS1Q96EZ8 462 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 NAP1L4Q99733 375 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 KCNMB3Q9NPA1 279 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 PARD6AQ9NPB6 346 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 GDE1Q9NZC3 331 aa19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 DNMT3BQ9UBC3 853 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 NDRG2Q9UN36 371 aaKnown RBP19.75■□□□□ 0.75
TSPAN3-208ENST00000560514 M0R2N6 131 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 MAN2B1O00754 1011 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 TBX3O15119 743 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 B4GALT5O43286 388 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 CCNT1O60563 726 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 DGAT1O75907 488 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 BAG4O95429 457 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 THP07101 528 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 TGM1P22735 817 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 RPS6KB1P23443 525 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 PDIA3P30101 505 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 OR1D2P34982 312 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 RAB33AQ14088 237 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 AMHR2Q16671 573 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 CPLX2Q6PUV4 134 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 NEK8Q86SG6 692 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 FAM177A1Q8N128 213 aaPredicted RBP19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 DNASE1L2Q92874 299 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 IER2Q9BTL4 223 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 NFKBIZQ9BYH8 718 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 XPNPEP1Q9NQW7 623 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 RALGAPA1Q6GYQ0 2036 aa19.74■□□□□ 0.75
TSPAN3-208ENST00000560514 A0A1B0GUA9 196 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 SLC30A4O14863 429 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 ZBTB39O15060 712 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 KCNA4P22459 653 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 PSMA5P28066 241 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 ASAP3Q8TDY4 903 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 ELSPBP1Q96BH3 223 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 BRD9Q9H8M2 597 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 NOTCH4Q99466 2003 aa19.73■□□□□ 0.75
TSPAN3-208ENST00000560514 ADAM12O43184 909 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 LRP3O75074 770 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 RETP07949 1114 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 RHOP08100 348 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 CCR3P51677 355 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 SLFN12Q8IYM2 578 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 AGXT2Q9BYV1 514 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 PLA2G2FQ9BZM2 168 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 CHRDQ9H2X0 955 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 SNX14Q9Y5W7 946 aa19.72■□□□□ 0.75
TSPAN3-208ENST00000560514 VWA8A3KMH1 1905 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 LRRIQ4A6NIV6 560 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 CDC45O75419 566 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 LRG1P02750 347 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 GLRA2P23416 452 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 ELF1P32519 619 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 ARL2P36404 184 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 TANGO2Q6ICL3 276 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 PRIMPOLQ96LW4 560 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 ZFP14Q9HCL3 533 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 CDY1Q9Y6F8 540 aa19.71■□□□□ 0.75
TSPAN3-208ENST00000560514 PTPN2P17706 415 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 FZD5Q13467 585 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 SIM2Q14190 667 aaPredicted RBP19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 ZBTB8OSQ8IWT0 167 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 DDX1Q92499 740 aaKnown RBP19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 FAM3CQ92520 227 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 HAS1Q92839 578 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 KCNB2Q92953 911 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 IRF7Q92985 503 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 ADPGKQ9BRR6 497 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 TRMT61BQ9BVS5 477 aaKnown RBP19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 POLR3FQ9H1D9 316 aaPredicted RBP19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 LMAN1LQ9HAT1 526 aa19.7■□□□□ 0.74
TSPAN3-208ENST00000560514 ANKEF1Q9NU02 776 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms