RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FAM189A1O60320 539 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 ZC3H11AO75152 810 aaKnown RBP eCLIP15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 POMCP01189 267 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 ADRB2P07550 413 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 GALTP07902 379 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 PPP1R2P41236 205 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 SCNN1GP51170 649 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 PPP2R3AQ06190 1150 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 KNOP1Q1ED39 458 aaKnown RBP15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 TIGD5Q53EQ6 642 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 SLC39A4Q6P5W5 647 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 NT5DC4Q86YG4 428 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 C12orf56Q8IXR9 622 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 COLGALT2Q8IYK4 626 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 SLC39A11Q8N1S5 342 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 KLHL23Q8NBE8 558 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 SCFD1Q8WVM8 642 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 PPP2R3CQ969Q6 453 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 TMEM169Q96HH4 297 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 ASB7Q9H672 318 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 RPF1Q9H9Y2 349 aaKnown RBP15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 CERS4Q9HA82 394 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 CPSF3Q9UKF6 684 aaKnown RBP15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 MTUS1Q9ULD2 1270 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 USP20Q9Y2K6 914 aa15.24■□□□□ 0.03
PKNOX1-209ENST00000560448 CITO14578 2027 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 LPXNO60711 386 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 FGF18O76093 207 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 PRPF6O94906 941 aaKnown RBP15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 CASP1P29466 404 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 TPRNQ4KMQ1 711 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 COBLL1Q53SF7 1204 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 ARMCX5Q6P1M9 558 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 CEP120Q8N960 986 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 DDX27Q96GQ7 796 aaKnown RBP15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 ZBTB45Q96K62 511 aaPredicted RBP15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 COLEC11Q9BWP8 271 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 RBSNQ9H1K0 784 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 FAN1Q9Y2M0 1017 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 DERAQ9Y315 318 aa15.23■□□□□ 0.03
PKNOX1-209ENST00000560448 COL4A4P53420 1690 aaPredicted RBP15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 SZT2Q5T011 3432 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 SMIM28A0A1B0GU29 152 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 TTC26A0AVF1 554 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 EPOPA6NHQ4 379 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 TMEM189-UBE2V1I3L0A0 370 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 PTGESO14684 152 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 IL18RAPO95256 599 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 ITGB1P05556 798 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 HARSP12081 509 aaKnown RBP15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 PAX3P23760 479 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 ADSSP30520 456 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 KCNA1Q09470 495 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 STK4Q13043 487 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 GPR65Q8IYL9 337 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 KIAA0895Q8NCT3 520 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 SPPL3Q8TCT6 385 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 GDPD5Q8WTR4 605 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 MYLIPQ8WY64 445 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 IGSF21Q96ID5 467 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 PPP1R10Q96QC0 940 aaKnown RBP15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 FUCA2Q9BTY2 467 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 HAPLN2Q9GZV7 340 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 MYO9BQ13459 2157 aa15.22■□□□□ 0.03
PKNOX1-209ENST00000560448 ANKRD63C9JTQ0 380 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 PDXKO00764 312 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 NRP1O14786 923 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 NCK2O43639 380 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 EXTL3O43909 919 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 DDHD2O94830 711 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 CYP3A5P20815 502 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 RPL9P32969 192 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 AFF1P51825 1210 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 OSTNP61366 133 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 ELAVL2Q12926 359 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 SURF1Q15526 300 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 SLC10A6Q3KNW5 377 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 ZNF658Q5TYW1 1059 aaPredicted RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 DDX53Q86TM3 631 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 ZNF280BQ86YH2 543 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 GUF1Q8N442 669 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 POF1BQ8WVV4 589 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 HPS3Q969F9 1004 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 FGFBP2Q9BYJ0 223 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 TSPY26PQ9H489 355 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 NGRNQ9NPE2 291 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 MIOSQ9NXC5 875 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 UBQLN1Q9UMX0 589 aaKnown RBP15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 C2CD2Q9Y426 696 aa15.21■□□□□ 0.03
PKNOX1-209ENST00000560448 MTCH2Q9Y6C9 303 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms