RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 GUCY2DQ02846 1103 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 SURF1Q15526 300 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 EMC10Q5UCC4 262 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 SLC39A4Q6P5W5 647 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 ZPBP2Q6X784 338 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 LEKR1Q6ZMV7 388 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 RPUSD2Q8IZ73 545 aaKnown RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 ANKRD35Q8N283 1001 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 GTF3C2Q8WUA4 911 aaPredicted RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 PSPC1Q8WXF1 523 aaKnown RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 SLC7A3Q8WY07 619 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 BSNDQ8WZ55 320 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 KREMEN1Q96MU8 473 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 ZCCHC17Q9NP64 241 aaKnown RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 C1orf112Q9NSG2 853 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 EHD2Q9NZN4 543 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 ADGRA3Q8IWK6 1321 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 ZSWIM8A7E2V4 1837 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 A0A0G2JLL6 359 aaPredicted RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 TISP43B9A030 160 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 AGPSO00116 658 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 SART1O43290 800 aaKnown RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 LRRN2O75325 713 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 CHRNB2P17787 502 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 TBXAS1P24557 533 aaPredicted RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 ACTN2P35609 894 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 GGCXP38435 758 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 SLC26A2P50443 739 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 SLC7A5Q01650 507 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 FMO1Q01740 532 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 MAP2K1Q02750 393 aaPredicted RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 PRPF4BQ13523 1007 aaKnown RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 TARBP2Q15633 366 aaKnown RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 ZACNQ401N2 412 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 WDR44Q5JSH3 913 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 CFAP58Q5T655 872 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 SV2AQ7L0J3 742 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 PRRT2Q7Z6L0 340 aaPredicted RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 ERO1BQ86YB8 467 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 IQCKQ8N0W5 287 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 PPM1KQ8N3J5 372 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 FAM76AQ8TAV0 307 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 DEPTORQ8TB45 409 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 MAIP1Q8WWC4 291 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 TCP11Q8WWU5 503 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 CASKIN2Q8WXE0 1202 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 ARHGEF26Q96DR7 871 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 BICD1Q96G01 975 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 VCPIP1Q96JH7 1222 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 ZSWIM1Q9BR11 485 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 THAP2Q9H0W7 228 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 FAM204AQ9H8W3 233 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 SEPT11Q9NVA2 429 aaKnown RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 SMARCAL1Q9NZC9 954 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 RASAL2Q9UJF2 1139 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 PACSIN2Q9UNF0 486 aaPredicted RBP10.43□□□□□ -0.74
RTF1-206ENST00000560447 ALG6Q9Y672 507 aa10.43□□□□□ -0.74
RTF1-206ENST00000560447 TMEM150BA6NC51 233 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 GOLGA8IPA6NC78 632 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 GOLGA6CA6NDK9 693 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 UNCXA6NJT0 531 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 GOLGA8JA6NMD2 632 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SRRM3A6NNA2 597 aaPredicted RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 K7ERI5 159 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 PODXLO00592 558 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 DPYSL4O14531 572 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SHOX2O60902 331 aaPredicted RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 MAFO75444 373 aaPredicted RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 ZMYND10O75800 440 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 FARP2O94887 1054 aaPredicted RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 SGPL1O95470 568 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 GOLGA6DP0CG33 693 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 CYP11B1P15538 503 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 ABCB4P21439 1286 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 CHRNA3P32297 505 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 NF2P35240 595 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SLC1A1P43005 524 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 CARSP49589 748 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 HIRAP54198 1017 aaPredicted RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 POU5F1Q01860 360 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 VGLL4Q14135 290 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 MTERF2Q49AM1 385 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SEL1L2Q5TEA6 688 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 IER5Q5VY09 327 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 ACAD10Q6JQN1 1059 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 METTL7BQ6UX53 244 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 CROCCP2Q86T23 111 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 NOP9Q86U38 636 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 SLC20A1Q8WUM9 679 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SEPT1Q8WYJ6 367 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 SEMA4DQ92854 862 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
RTF1-206ENST00000560447 SAAL1Q96ER3 474 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 FAXDC2Q96IV6 333 aa10.42□□□□□ -0.74
RTF1-206ENST00000560447 RNPC3Q96LT9 517 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms