RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 KIAA1468Q9P260 1216 aa16.16■□□□□ 0.18
IDH3A-219ENST00000560414 CDH22Q9UJ99 828 aa16.16■□□□□ 0.18
IDH3A-219ENST00000560414 TDRD15B5MCY1 1934 aaKnown RBP16.15■□□□□ 0.18
IDH3A-219ENST00000560414 LILRB3O75022 631 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 NR1I2O75469 434 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 SOD2P04179 222 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 PLS3P13797 630 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 EPCAMP16422 314 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 LONP1P36776 959 aaKnown RBP16.15■□□□□ 0.18
IDH3A-219ENST00000560414 GIT2Q14161 759 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 DCAF4L1Q3SXM0 396 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 SUSD6Q92537 303 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 TATDN2Q93075 761 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 EPSTI1Q96J88 318 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 KLHL5Q96PQ7 755 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
IDH3A-219ENST00000560414 PAAF1Q9BRP4 392 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 TIPINQ9BVW5 301 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 TARS2Q9BW92 718 aaKnown RBP16.15■□□□□ 0.18
IDH3A-219ENST00000560414 COLEC11Q9BWP8 271 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 C17orf75Q9HAS0 396 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 TNFSF13BQ9Y275 285 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 PHLPP2Q6ZVD8 1323 aa16.15■□□□□ 0.18
IDH3A-219ENST00000560414 CASTOR2A6NHX0 329 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 PI4K2BG5E9Z4 385 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 STX6O43752 255 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 EFEMP2O95967 443 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 CNPP09543 421 aaKnown RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 HOXB8P17481 243 aaPredicted RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 PLCG1P19174 1290 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 MCM6Q14566 821 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 KANK3Q6NY19 840 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 GPBP1Q86WP2 473 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 C12orf76Q8N812 135 aaPredicted RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 CEP120Q8N960 986 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 RASSF8Q8NHQ8 419 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 SLC22A17Q8WUG5 538 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 SNX21Q969T3 373 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 B3GALT6Q96L58 329 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 CLIC6Q96NY7 704 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 POP1Q99575 1024 aaKnown RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 NTPCRQ9BSD7 190 aaKnown RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 HERC2P3Q9BVR0 1158 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 MRPL4Q9BYD3 311 aaKnown RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 GPR62Q9BZJ7 368 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 CDT1Q9H211 546 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 PTPRHQ9HD43 1115 aa16.14■□□□□ 0.17
IDH3A-219ENST00000560414 MRPL17Q9NRX2 175 aaKnown RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
IDH3A-219ENST00000560414 ZMYM2Q9UBW7 1377 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 SLC26A4O43511 780 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 URODP06132 367 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 THP07101 528 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 KLRC2P26717 231 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 OSTNP61366 133 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 TUSC3Q13454 348 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 NAB2Q15742 525 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 ZNF568Q3ZCX4 644 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 GLRA4Q5JXX5 417 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 FUT10Q6P4F1 479 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 TMEM161BQ8NDZ6 487 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 FEZF2Q8TBJ5 459 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 HASPINQ8TF76 798 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 RAD54LQ92698 747 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 ZBTB45Q96K62 511 aaPredicted RBP16.13■□□□□ 0.17
IDH3A-219ENST00000560414 RPGRIP1Q96KN7 1286 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 EMILIN2Q9BXX0 1053 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 KCND2Q9NZV8 630 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 STK39Q9UEW8 545 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 RABGEF1Q9UJ41 708 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 FBXO2Q9UK22 296 aaPredicted RBP16.13■□□□□ 0.17
IDH3A-219ENST00000560414 VPS9D1Q9Y2B5 631 aa16.13■□□□□ 0.17
IDH3A-219ENST00000560414 FAM86C2PA6NEL3 165 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 C3orf80F5H4A9 247 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 ABLIM1O14639 778 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 TADA2AO75478 443 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 MAPTP10636 758 aaKnown RBP16.12■□□□□ 0.17
IDH3A-219ENST00000560414 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
IDH3A-219ENST00000560414 GLUD2P49448 558 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 SMTNP53814 917 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 STRN3Q13033 797 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
IDH3A-219ENST00000560414 CBX2Q14781 532 aaPredicted RBP16.12■□□□□ 0.17
IDH3A-219ENST00000560414 RARS2Q5T160 578 aaKnown RBP16.12■□□□□ 0.17
IDH3A-219ENST00000560414 KIAA0319Q5VV43 1072 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 PARP9Q8IXQ6 854 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 TCHPQ9BT92 498 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 PHF7Q9BWX1 381 aaPredicted RBP16.12■□□□□ 0.17
IDH3A-219ENST00000560414 C1QTNF1Q9BXJ1 281 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 CCSER1Q9C0I3 900 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 KDM4CQ9H3R0 1056 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 ADAM28Q9UKQ2 775 aa16.12■□□□□ 0.17
IDH3A-219ENST00000560414 SRPRBQ9Y5M8 271 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms