RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 EMILIN2Q9BXX0 1053 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 CDT1Q9H211 546 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 PARVGQ9HBI0 331 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 KLK14Q9P0G3 267 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 TFIP11Q9UBB9 837 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 SSX2IPQ9Y2D8 614 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 LILRB3O75022 631 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 SOD2P04179 222 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 EPCAMP16422 314 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 GRM5P41594 1212 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 STRN3Q13033 797 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 NAB2Q15742 525 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 RRAGBQ5VZM2 374 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 ZPBP2Q6X784 338 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 RPS6KC1Q96S38 1066 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 FIZ1Q96SL8 496 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 HERC2P3Q9BVR0 1158 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 SFXN1Q9H9B4 322 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 USTQ9Y2C2 406 aa16.64■□□□□ 0.25
SNRPA1-210ENST00000560383 NR1I2O75469 434 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 TOM1L1O75674 476 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 FAM13AO94988 1023 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 URODP06132 367 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 MCF2P10911 925 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 CLCN4P51793 760 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 TUSC3Q13454 348 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 ZNF568Q3ZCX4 644 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 XKR4Q5GH76 650 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 MPZL3Q6UWV2 235 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 HAUS6Q7Z4H7 955 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 ASIC4Q96FT7 647 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 PRRX2Q99811 253 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 CXCL16Q9H2A7 254 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 CDH22Q9UJ99 828 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 PRG3Q9Y2Y8 225 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 C2orf16Q68DN1 1984 aa16.63■□□□□ 0.25
SNRPA1-210ENST00000560383 A0A087X0B3 334 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 TRAK2O60296 914 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 THP07101 528 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 OR1G1P47890 313 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 ATAT1Q5SQI0 421 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 AXDND1Q5T1B0 1012 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 ALKAL1Q6UXT8 129 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 C15orf39Q6ZRI6 1047 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 SUGP1Q8IWZ8 645 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 GPR65Q8IYL9 337 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 UBALD2Q8IYN6 164 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 ZDHHC14Q8IZN3 488 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 FBXL6Q8N531 539 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 MYCT1Q8N699 235 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 CEP120Q8N960 986 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 PBXIP1Q96AQ6 731 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 KLHL5Q96PQ7 755 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 COLEC11Q9BWP8 271 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 SORCS3Q9UPU3 1222 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 PLXNA3P51805 1871 aa16.62■□□□□ 0.25
SNRPA1-210ENST00000560383 MYMKA6NI61 221 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 C2CD4DB7Z1M9 353 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 CUTAO60888 179 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 TBCAO75347 108 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 C1RP00736 705 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 PIGRP01833 764 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 KRT18P05783 430 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 ADH1AP07327 375 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 KLRC2P26717 231 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 ABCD1P33897 745 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 GLUD2P49448 558 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 GTF2BQ00403 316 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 NHLH1Q02575 133 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 MCL1Q07820 350 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 MTMR3Q13615 1198 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 GPR149Q86SP6 731 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 CMASQ8NFW8 434 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 KCNG4Q8TDN1 519 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 ZBTB45Q96K62 511 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 PPP1R10Q96QC0 940 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 CCDC94Q9BW85 323 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 RHOBTB2Q9BYZ6 727 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 TOPORSQ9NS56 1045 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 CHST7Q9NS84 486 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 DPP7Q9UHL4 492 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 TBX20Q9UMR3 447 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 ZDBF2Q9HCK1 2354 aa16.61■□□□□ 0.25
SNRPA1-210ENST00000560383 F8W810 466 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms