RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 GPS2Q13227 327 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 NAA35Q5VZE5 725 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 EFCAB12Q6NXP0 572 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 THNSL1Q8IYQ7 743 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 TAF4BQ92750 862 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 EXOC4Q96A65 974 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 COQ4Q9Y3A0 265 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 PRKCBP05771 671 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 IQCF3P0C7M6 154 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 CCDC172P0C7W6 258 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 RFX1P22670 979 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 LLGL1Q15334 1064 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 CFAP221Q4G0U5 840 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 TAPT1Q6NXT6 567 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 DPP9Q86TI2 863 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 RFFLQ8WZ73 363 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 LENG1Q96BZ8 264 aaPredicted RBP15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 APOBEC3GQ9HC16 384 aaKnown RBP15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 C1orf112Q9NSG2 853 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 CTTNBP2NLQ9P2B4 639 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 H0YCG3 227 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 CFHP08603 1231 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 PRLRP16471 622 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 ZNF211Q13398 564 aaPredicted RBP15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 CASP8Q14790 479 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 PSMD6Q15008 389 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 AADACL2Q6P093 401 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 PASD1Q8IV76 773 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 TMEM192Q8IY95 271 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 KRT12Q99456 494 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 PSD3Q9NYI0 1048 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 VPS18Q9P253 973 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 TULP2O00295 520 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 LGR5O75473 907 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 VTNP04004 478 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 INSRRP14616 1297 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 PDE6CP51160 858 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 TRADDQ15628 312 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 ZNF792Q3KQV3 632 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 ZACNQ401N2 412 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 PRAMEF19Q5SWL8 479 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 NT5DC3Q86UY8 548 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 MSL3Q8N5Y2 521 aaKnown RBP15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 FAM167AQ96KS9 214 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 MTMR12Q9C0I1 747 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 MAF1Q9H063 256 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 CPA4Q9UI42 421 aa15.15■□□□□ 0.02
CARMIL3-203ENST00000560349 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 ADCY6O43306 1168 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 C4BPAP04003 597 aaKnown RBP15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 LGALS2P05162 132 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 COPB2P35606 906 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 MARCKSL1P49006 195 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 LMAN1P49257 510 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 GTF2A2P52657 109 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 C8orf74Q6P047 294 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 ILDR2Q71H61 639 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 USP37Q86T82 979 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 STYXL1Q9Y6J8 313 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 ADGRA2Q96PE1 1338 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 ASB14A6NK59 587 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 PHACTR2O75167 634 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 CST3P01034 146 aaPredicted RBP15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 CCNA1P78396 465 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 MAPK6Q16659 721 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 MAMDC4Q6UXC1 1216 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 C15orf39Q6ZRI6 1047 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 RPGRIP1Q96KN7 1286 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 SMARCAD1Q9H4L7 1026 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 GINS2Q9Y248 185 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 CNTNAP2Q9UHC6 1331 aa15.14■□□□□ 0.01
CARMIL3-203ENST00000560349 SCN4AP35499 1836 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 ANKRD62A6NC57 917 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 SNAI1O95863 264 aaPredicted RBP15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 ITGA4P13612 1032 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 ANXA13P27216 316 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 ZSCAN26Q16670 478 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 IER5Q5VY09 327 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 WDR93Q6P2C0 686 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 CCDC113Q9H0I3 377 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 TSKSQ9UJT2 592 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 FAN1Q9Y2M0 1017 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 NUB1Q9Y5A7 615 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 GLI1P08151 1106 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 CAPN2P17655 700 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 MESDQ14696 234 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 ZNF394Q53GI3 561 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 DCAF12L1Q5VU92 463 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 KCNV1Q6PIU1 500 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 PLPPR4Q7Z2D5 763 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 CPA5Q8WXQ8 436 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms