RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	MEIS3P2	A8K0S8	358 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	CAVIN2	O95810	425 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	GNA14	O95837	355 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	TH	P07101	528 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	KCNE1	P15382	129 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	MLH1	P40692	756 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	TNFSF9	P41273	254 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	STX17	P56962	302 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	PPP2R3A	Q06190	1150 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	ZBTB41	Q5SVQ8	909 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	CEP135	Q66GS9	1140 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	USP37	Q86T82	979 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	NT5DC4	Q86YG4	428 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.33	□□□□□ -0.28
USP8-209	ENST00000560297	CSGALNACT2	Q8N6G5	542 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	RDH13	Q8NBN7	331 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	HELQ	Q8TDG4	1101 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	NOC3L	Q8WTT2	800 aa	Known RBP	13.33	□□□□□ -0.28
USP8-209	ENST00000560297	FAM212A	Q96EL1	285 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	SNX27	Q96L92	541 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	MFSD14A	Q96MC6	490 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	SLC38A7	Q9NVC3	462 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	RBAK	Q9NYW8	714 aa	Predicted RBP	13.33	□□□□□ -0.28
USP8-209	ENST00000560297	KLK14	Q9P0G3	267 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	CNTN3	Q9P232	1028 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	DERA	Q9Y315	318 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	PCDHA11	Q9Y5I1	949 aa		13.33	□□□□□ -0.28
USP8-209	ENST00000560297	SMIM28	A0A1B0GU29	152 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	TRIM49B	A6NDI0	452 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	LACTBL1	A8MY62	500 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	SLC16A3	O15427	465 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	CXCL8	P10145	99 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	EPB41	P11171	864 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	SMAD3	P84022	425 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	RNASEL	Q05823	741 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	ENPEP	Q07075	957 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	BTG3	Q14201	252 aa	Predicted RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	RAB30	Q15771	203 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	TPD52L1	Q16890	204 aa	Predicted RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	SPATA1	Q5VX52	437 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	CBWD2	Q8IUF1	395 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	BRSK2	Q8IWQ3	736 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	GSTCD	Q8NEC7	633 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	ZSWIM2	Q8NEG5	633 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	ENOX1	Q8TC92	643 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	ZFP42	Q96MM3	310 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	DUSP9	Q99956	384 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	FUCA2	Q9BTY2	467 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	SRRT	Q9BXP5	876 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	METTL14	Q9HCE5	456 aa	Known RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	MSRA	Q9UJ68	235 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	COLQ	Q9Y215	455 aa	Predicted RBP	13.32	□□□□□ -0.28
USP8-209	ENST00000560297	INPP5F	Q9Y2H2	1132 aa		13.32	□□□□□ -0.28
USP8-209	ENST00000560297	XPOT	O43592	962 aa	Known RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	AKAP3	O75969	853 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	KRT13	P13646	458 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	CASP4	P49662	377 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	SCNN1G	P51170	649 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	CYP24A1	Q07973	514 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	GRIK3	Q13003	919 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	PSMD6	Q15008	389 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	LRIT3	Q3SXY7	679 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	ANO6	Q4KMQ2	910 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	LRRC55	Q6ZSA7	311 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	INTS8	Q75QN2	995 aa	Known RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	FAM186B	Q8IYM0	893 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	LRRC43	Q8N309	656 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	FIBCD1	Q8N539	461 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	SP7	Q8TDD2	431 aa	Predicted RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	TMC2	Q8TDI7	906 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	CACTIN	Q8WUQ7	758 aa	Known RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	FAM193B	Q96PV7	902 aa	Predicted RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	MED15	Q96RN5	788 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	FNBP1	Q96RU3	617 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	BPIFA3	Q9BQP9	254 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	GZF1	Q9H116	711 aa	Predicted RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	DNAJC25	Q9H1X3	360 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	RC3H2	Q9HBD1	1191 aa	Known RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	TBC1D13	Q9NVG8	400 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	MIOS	Q9NXC5	875 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	C2CD2	Q9Y426	696 aa		13.31	□□□□□ -0.28
USP8-209	ENST00000560297	TNRC18	O15417	2968 aa	Predicted RBP	13.31	□□□□□ -0.28
USP8-209	ENST00000560297	GRXCR1	A8MXD5	290 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	PTGES	O14684	152 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	IKBKB	O14920	756 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	POMC	P01189	267 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	ALDH2	P05091	517 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	CYP3A5	P20815	502 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	ZNF165	P49910	485 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	GATM	P50440	423 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	AFF1	P51825	1210 aa	Known RBP	13.3	□□□□□ -0.28
USP8-209	ENST00000560297	RABGGTB	P53611	331 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	AP3M2	P53677	418 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	MCCD1	P59942	119 aa	Predicted RBP	13.3	□□□□□ -0.28
USP8-209	ENST00000560297	ZBTB6	Q15916	424 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	PAN2	Q504Q3	1202 aa	Known RBP	13.3	□□□□□ -0.28
USP8-209	ENST00000560297	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.3	□□□□□ -0.28
USP8-209	ENST00000560297	JADE1	Q6IE81	842 aa		13.3	□□□□□ -0.28
USP8-209	ENST00000560297	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms