RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 PSPC1Q8WXF1 523 aaKnown RBP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 KIFAP3Q92845 792 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 FBXL18Q96ME1 805 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 PABPC3Q9H361 631 aaKnown RBP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 HACL1Q9UJ83 578 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 ANAPC7Q9UJX3 599 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 MEFVO15553 781 aaPredicted RBP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 TRAPPC3O43617 180 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 KIAA0754O94854 1291 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 HSPA6P17066 643 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 SLCO1A2P46721 670 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 RWDD2BP57060 319 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 IFI35P80217 286 aaPredicted RBP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 SF3A3Q12874 501 aaKnown RBP eCLIP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 OTUD6AQ7L8S5 288 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 CCDC25Q86WR0 208 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 SLC17A8Q8NDX2 589 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 EPS8L3Q8TE67 593 aaKnown RBP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 ATG4AQ8WYN0 398 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 PTPRJQ12913 1337 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 O00370 1275 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 CPP00450 1065 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 NUDT17P0C025 328 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 RRM1P23921 792 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ACOT2P49753 483 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 HMGCS2P54868 508 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 NLRP11P59045 1033 aaKnown RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 MCCD1P59942 119 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 TRIP13Q15645 432 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 CLUL1Q15846 466 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 SCARA3Q6AZY7 606 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 PASD1Q8IV76 773 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 OTUD6BQ8N6M0 293 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 REPS2Q8NFH8 660 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 TMEM143Q96AN5 459 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 GPRASP2Q96D09 838 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 SELENOSQ9BQE4 189 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 NTPCRQ9BSD7 190 aaKnown RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 CHST7Q9NS84 486 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 UVRAGQ9P2Y5 699 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 DDX20Q9UHI6 824 aaKnown RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 CAPN7Q9Y6W3 813 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 MROH7Q68CQ1 1323 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ZNFX1Q9P2E3 1918 aaKnown RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 DOCK5Q9H7D0 1870 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 PEX10O60683 326 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 GGPS1O95749 300 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 MAPK4P31152 587 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 DRG2P55039 364 aaKnown RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 EIF3BP55884 814 aaKnown RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 BACE1P56817 501 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ACTR2P61160 394 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 CYP1B1Q16678 543 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ZBTB41Q5SVQ8 909 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 MICALL2Q8IY33 904 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 MORC4Q8TE76 937 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 JDP2Q8WYK2 163 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ATP6V0A1Q93050 837 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 ZBTB45Q96K62 511 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 FAM118BQ9BPY3 351 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 SENP7Q9BQF6 1050 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 HAPLN2Q9GZV7 340 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
LRRC28-216ENST00000559819 PDLIM7Q9NR12 457 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 CYP26B1Q9NR63 512 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 MTUS1Q9ULD2 1270 aa10.75□□□□□ -0.69
LRRC28-216ENST00000559819 PODXLO00592 558 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 GJB6O95452 261 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 PSAPP07602 524 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 TNFAIP1Q13829 316 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 BYSLQ13895 437 aaKnown RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 TMEM132BQ14DG7 1078 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 HOOK3Q86VS8 718 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 MCOLN2Q8IZK6 566 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 ART4Q93070 314 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 PAGR1Q9BTK6 254 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 DDX23Q9BUQ8 820 aaKnown RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 ATP6V0A4Q9HBG4 840 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 DNAJC17Q9NVM6 304 aaKnown RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 SLC9A2Q9UBY0 812 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 MYPNQ86TC9 1320 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 DGAT1O75907 488 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 HLA-DRAP01903 254 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 UNGP13051 313 aaPredicted RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 CHN1P15882 459 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 TNNI1P19237 187 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 SCP2P22307 547 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 GTF2H1P32780 548 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 CHKAP35790 457 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 GMPSP49915 693 aaPredicted RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 LIG4P49917 911 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 ZNF280AP59817 542 aaPredicted RBP10.74□□□□□ -0.69
LRRC28-216ENST00000559819 SP2Q02086 613 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 FSTL1Q12841 308 aa10.74□□□□□ -0.69
LRRC28-216ENST00000559819 PPP1R7Q15435 360 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms