RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FGD1P98174 961 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 TBC1D8BQ0IIM8 1120 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 SMC1AQ14683 1233 aaKnown RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 LONRF3Q496Y0 759 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 MTERF2Q49AM1 385 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 PRRT3Q5FWE3 981 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 XKR3Q5GH77 459 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 EARS2Q5JPH6 523 aaKnown RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 UBXN11Q5T124 520 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 PLA2G4FQ68DD2 849 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 AGMOQ6ZNB7 445 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 RUFY3Q7L099 469 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 MIER3Q7Z3K6 550 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 TMC7Q7Z402 723 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 ZNF280BQ86YH2 543 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 DAGLBQ8NCG7 672 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 CCDC148Q8NFR7 591 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 RDM1Q8NG50 284 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 BICD2Q8TD16 824 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 HAS1Q92839 578 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 IGSF21Q96ID5 467 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 TEKT3Q9BXF9 490 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 MINDY3Q9H8M7 445 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 KCNMB3Q9NPA1 279 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 GJB4Q9NTQ9 266 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 FAM105AQ9NUU6 356 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 TBC1D13Q9NVG8 400 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 FAM86C1Q9NVL1 165 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 DNAJB4Q9UDY4 337 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
USP3-215ENST00000559771 IRAK3Q9Y616 596 aa6.51□□□□□ -1.37
USP3-215ENST00000559771 FSD2A1L4K1 749 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 ZBTB39O15060 712 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 LILRB3O75022 631 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 CXCL14O95715 111 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 GALTP07902 379 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 CTSAP10619 480 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 ANP32AP39687 249 aaKnown RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 SLC11A1P49279 550 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 NLRP5P59047 1200 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 KRT17Q04695 432 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 SPIRE1Q08AE8 756 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 CLN3Q13286 438 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 PPP2R5CQ13362 524 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 PTPN14Q15678 1187 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 INF2Q27J81 1249 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 MOXD1Q6UVY6 613 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 MRPL10Q7Z7H8 261 aaKnown RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 DDX53Q86TM3 631 aaKnown RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 ZNF410Q86VK4 478 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 RHPN2Q8IUC4 686 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 ABI1Q8IZP0 508 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 BLIDQ8IZY5 108 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 VPS52Q8N1B4 723 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 TMEM105Q8N8V8 129 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 KREMEN2Q8NCW0 462 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 CASP10Q92851 521 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 ZNF274Q96GC6 653 aaPredicted RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 RIPOR3Q96MK2 946 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 GCOM2Q9BZD3 368 aaPredicted RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 DHX33Q9H6R0 707 aaKnown RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 DACT1Q9NYF0 836 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 SUCLA2Q9P2R7 463 aaPredicted RBP6.5□□□□□ -1.37
USP3-215ENST00000559771 FKBPLQ9UIM3 349 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 KCNJ14Q9UNX9 436 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 ZDBF2Q9HCK1 2354 aa6.5□□□□□ -1.37
USP3-215ENST00000559771 DCHS1Q96JQ0 3298 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 F8W810 466 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 N4BP1O75113 896 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 ZC3H11AO75152 810 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP3-215ENST00000559771 DEXIO95424 95 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 CTDNEP1O95476 244 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 ASGR2P07307 311 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 ALDH7A1P49419 539 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 POLGP54098 1239 aaPredicted RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 PSMC5P62195 406 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 AKAP17AQ02040 695 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 ITIH3Q06033 890 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 SCRN1Q12765 414 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 NOMO2Q5JPE7 1267 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 RARS2Q5T160 578 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 TWF2Q6IBS0 349 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 KIAA1841Q6NSI8 718 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 TAS1R1Q7RTX1 841 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 SUGP1Q8IWZ8 645 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 RNF168Q8IYW5 571 aaPredicted RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 SMG8Q8ND04 991 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 PRPF31Q8WWY3 499 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 TMEM143Q96AN5 459 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 TMEM169Q96HH4 297 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 NLRP4Q96MN2 994 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 MDFIQ99750 246 aa6.49□□□□□ -1.37
USP3-215ENST00000559771 MRPL9Q9BYD2 267 aaKnown RBP6.49□□□□□ -1.37
USP3-215ENST00000559771 TM6SF1Q9BZW5 370 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms