RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 OGTO15294 1046 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 TLR2O60603 784 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 MSCO60682 206 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 TOM1L1O75674 476 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 PDGFRBP09619 1106 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 ADORA2BP29275 332 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 SSTR3P32745 418 aaPredicted RBP11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 FMO5P49326 533 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 SLC7A5Q01650 507 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 APBA1Q02410 837 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 ZBTB16Q05516 673 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 LMNTD2Q8IXW0 634 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC170Q8IYT3 715 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 DEFB118Q96PH6 123 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 STK38LQ9Y2H1 464 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 GUCY2CP25092 1073 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 GRK4P32298 578 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 VPS41P49754 854 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 HSD17B4P51659 736 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 PPP2R5DQ14738 602 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 CDO1Q16878 200 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 TAF2Q6P1X5 1199 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 CBWD2Q8IUF1 395 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 GLYCTKQ8IVS8 523 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 GSPT2Q8IYD1 628 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 EPB41L5Q9HCM4 733 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 PCDHB7Q9Y5E2 793 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 BTAF1O14981 1849 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 PHF20L1A8MW92 1017 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 SPATA31C2B4DYI2 1134 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 EXTL3O43909 919 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 PLCB4Q15147 1175 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 BSPRYQ5W0U4 402 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 CPB2Q96IY4 423 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 C11orf70Q9BRQ4 267 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 TXNDC16Q9P2K2 825 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 B3GAT3O94766 335 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 GAS8O95995 478 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 ACTN1P12814 892 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 GNA15P30679 374 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 HSDL1Q3SXM5 330 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 NKIRAS1Q9NYS0 192 aa11.36□□□□□ -0.59
CARMIL3-202ENST00000559694 SLC16A3O15427 465 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 HEXIM1O94992 359 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 ELMSAN1Q6PJG2 1045 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 VSIG1Q86XK7 387 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 L3MBTL3Q96JM7 780 aaPredicted RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 INPP4AQ96PE3 977 aaPredicted RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CYP3A7-CYP3A51PA0A087WV96 503 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 M0QYV0 167 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CHUKO15111 745 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CD4P01730 458 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 HLA-DRAP01903 254 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 SLC9A1P19634 815 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CYP3A7P24462 503 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 PTGISQ16647 500 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 SGSM1Q2NKQ1 1148 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC89Q8N998 374 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CCDC97Q96F63 343 aaPredicted RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 KRT12Q99456 494 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 PI4K2AQ9BTU6 479 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CALN1Q9BXU9 219 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 SLC12A6Q9UHW9 1150 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 A0A087X0B3 334 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CYP26A1O43174 497 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 CASP4P49662 377 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 PPP1R2P3Q6NXS1 205 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 PPP1R21Q6ZMI0 780 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 TNIP3Q96KP6 325 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 SLC38A7Q9NVC3 462 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 PSD3Q9NYI0 1048 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 COL20A1Q9P218 1284 aa11.35□□□□□ -0.59
CARMIL3-202ENST00000559694 KRIT1O00522 736 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 WNT7AO00755 349 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PAN2Q504Q3 1202 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 ENOSF1Q7L5Y1 443 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 APPL2Q8NEU8 664 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 MAIP1Q8WWC4 291 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 SEPT8Q92599 483 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 GCNAQ96QF7 691 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 MKNK1Q9BUB5 465 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 CNOT8Q9UFF9 292 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PCDHA13Q9Y5I0 950 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 PABPN1LA6NDY0 278 aaKnown RBP11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 IL18RAPO95256 599 aa11.34□□□□□ -0.59
CARMIL3-202ENST00000559694 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms