RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 SPC25Q9HBM1 224 aa4.6□□□□□ -1.67
AP3S2-210ENST00000559601 MSRAQ9UJ68 235 aa4.6□□□□□ -1.67
AP3S2-210ENST00000559601 NUMBLQ9Y6R0 609 aa4.6□□□□□ -1.67
AP3S2-210ENST00000559601 ZMYM3Q14202 1370 aa4.6□□□□□ -1.67
AP3S2-210ENST00000559601 FYCO1Q9BQS8 1478 aa4.6□□□□□ -1.67
AP3S2-210ENST00000559601 FSD2A1L4K1 749 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 MAST3O60307 1309 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 KPNA6O60684 536 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 BRD4O60885 1362 aaPredicted RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 NDUFA10O95299 355 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 ESRRBO95718 433 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 MAP4K4O95819 1239 aaPredicted RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 HSP90AA1P07900 732 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 VIL1P09327 827 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 DDX6P26196 483 aaKnown RBP eCLIP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 NEK4P51957 841 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 RRP1P56182 461 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 NHLH1Q02575 133 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 NAIPQ13075 1403 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 MYOM3Q5VTT5 1437 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 LMBR1LQ6UX01 489 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 BHLHA9Q7RTU4 235 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 THNSL2Q86YJ6 484 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 CMTR2Q8IYT2 770 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 UBR7Q8N806 425 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 CPEB3Q8NE35 698 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 OR10H5Q8NGA6 315 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 PNISRQ8TF01 805 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 CHTF18Q8WVB6 975 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 CASKIN1Q8WXD9 1431 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 APPBP2Q92624 585 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 FUBP1Q96AE4 644 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 ADAM2Q99965 735 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 PDCL3Q9H2J4 239 aa4.59□□□□□ -1.67
AP3S2-210ENST00000559601 THG1LQ9NWX6 298 aaKnown RBP4.59□□□□□ -1.67
AP3S2-210ENST00000559601 PTPN23Q9H3S7 1636 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 EFCAB5A4FU69 1503 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 FGD6Q6ZV73 1430 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 SPATA31A6Q5VVP1 1343 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 TBKBP1A7MCY6 615 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 C1RP00736 705 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 GASTP01350 101 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 RNASE9P60153 205 aaKnown RBP4.58□□□□□ -1.68
AP3S2-210ENST00000559601 APBA1Q02410 837 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 MGAT5Q09328 741 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 PABPC4Q13310 644 aaKnown RBP eCLIP4.58□□□□□ -1.68
AP3S2-210ENST00000559601 FAM102AQ5T9C2 384 aaPredicted RBP4.58□□□□□ -1.68
AP3S2-210ENST00000559601 LHFPL2Q6ZUX7 228 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 C16orf86Q6ZW13 317 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 SLC41A1Q8IVJ1 513 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 ZNF610Q8N9Z0 462 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 CAVIN3Q969G5 261 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 ZNF496Q96IT1 587 aaPredicted RBP4.58□□□□□ -1.68
AP3S2-210ENST00000559601 PAWRQ96IZ0 340 aaKnown RBP4.58□□□□□ -1.68
AP3S2-210ENST00000559601 CHPF2Q9P2E5 772 aa4.58□□□□□ -1.68
AP3S2-210ENST00000559601 POLR2AP24928 1970 aaKnown RBP4.58□□□□□ -1.68
AP3S2-210ENST00000559601 ATAD2BQ9ULI0 1458 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 SCAPERQ9BY12 1400 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 ZNF891A8MT65 544 aaPredicted RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 TGM5O43548 720 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 CXCR5P32302 372 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 MXRA7P84157 204 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 MPP3Q13368 585 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 RALBP1Q15311 655 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 UBE3CQ15386 1083 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 BMT2Q1RMZ1 405 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 CCDC184Q52MB2 194 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 PDCD4Q53EL6 469 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 RNF187Q5TA31 235 aaPredicted RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 PAPD7Q5XG87 772 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 METRNLQ641Q3 311 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 EFCAB12Q6NXP0 572 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 NOL8Q76FK4 1167 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 MTERF4Q7Z6M4 381 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 STRA8Q7Z7C7 330 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 HOMER1Q86YM7 354 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 PRPF38AQ8NAV1 312 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 CDC5LQ99459 802 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 LRFN3Q9BTN0 628 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 PNNQ9H307 717 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 POGKQ9P215 609 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 TMPRSS11EQ9UL52 423 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 LAS1LQ9Y4W2 734 aaKnown RBP4.57□□□□□ -1.68
AP3S2-210ENST00000559601 FPGT-TNNI3KV9GXZ4 949 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 HECW1Q76N89 1606 aa4.57□□□□□ -1.68
AP3S2-210ENST00000559601 CUX1P39880 1505 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 FGD5Q6ZNL6 1462 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 PLEKHH2Q8IVE3 1493 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 LCHNA4D1U4 455 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 UNC119BA6NIH7 251 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 PJA2O43164 708 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 SPDEFO95238 335 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 ERBB2P04626 1255 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 CFIP05156 583 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 PDGFRBP09619 1106 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 MPLP40238 635 aa4.56□□□□□ -1.68
AP3S2-210ENST00000559601 KPNA1P52294 538 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms