RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ZC3H10Q96K80 434 aaKnown RBP10.81□□□□□ -0.68
SMAD3-211ENST00000559460 ZFP42Q96MM3 310 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 ASB16Q96NS5 453 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 CORO1BQ9BR76 489 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 AVENQ9NQS1 362 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-211ENST00000559460 COL4A3BPQ9Y5P4 624 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 ZZEF1O43149 2961 aa10.81□□□□□ -0.68
SMAD3-211ENST00000559460 ADAMTS20P59510 1910 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 GAS7O60861 476 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 SRGAP2CP0DJJ0 459 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 RXRAP19793 462 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 AXLP30530 894 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 SIM1P81133 766 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 RAB33AQ14088 237 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 TARBP2Q15633 366 aaKnown RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 PLK5Q496M5 336 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 PRR16Q569H4 304 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 UBXN11Q5T124 520 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 WWC2Q6AWC2 1192 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 IQCEQ6IPM2 695 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 RALGPS2Q86X27 583 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 SMG8Q8ND04 991 aaKnown RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 LNX1Q8TBB1 728 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 HNRNPLLQ8WVV9 542 aaKnown RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 SLC7A3Q8WY07 619 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 CCDC51Q96ER9 411 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 LRIG1Q96JA1 1093 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 RCAN3Q9UKA8 241 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 HES2Q9Y543 173 aa10.8□□□□□ -0.68
SMAD3-211ENST00000559460 FLNBO75369 2602 aaKnown RBP10.8□□□□□ -0.68
SMAD3-211ENST00000559460 BCLAF3A2AJT9 711 aaKnown RBP10.79□□□□□ -0.68
SMAD3-211ENST00000559460 E7EWF7 191 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 SPECC1L-ADORA2AF8WAN1 911 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 SPIRE1Q08AE8 756 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 PON2Q15165 354 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 UGCGQ16739 394 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 JAKMIP3Q5VZ66 844 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 MFSD6LQ8IWD5 586 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 EXOC8Q8IYI6 725 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 IGDCC4Q8TDY8 1250 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
SMAD3-211ENST00000559460 SH2D3AQ9BRG2 576 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 TEKT3Q9BXF9 490 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 EIF2AQ9BY44 585 aaKnown RBP10.79□□□□□ -0.68
SMAD3-211ENST00000559460 NIFKQ9BYG3 293 aaKnown RBP10.79□□□□□ -0.68
SMAD3-211ENST00000559460 CCDC86Q9H6F5 360 aaKnown RBP10.79□□□□□ -0.68
SMAD3-211ENST00000559460 IFT122Q9HBG6 1241 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 MIOSQ9NXC5 875 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 PARP2Q9UGN5 583 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 CDY1Q9Y6F8 540 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 TICRRQ7Z2Z1 1910 aa10.79□□□□□ -0.68
SMAD3-211ENST00000559460 IGKV6-21A0A0C4DH24 114 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 WDR27A2RRH5 827 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 DDX11L8A8MPP1 907 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 HEPACAM2A8MVW5 462 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 DPYSL4O14531 572 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 EXTL3O43909 919 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 MAFO75444 373 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-211ENST00000559460 MICAL2O94851 1124 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 CYP3A4P08684 503 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 CYP21A2P08686 494 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 CTHP32929 405 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 VIPR2P41587 438 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 SOX9P48436 509 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 LMAN2Q12907 356 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 TUSC3Q13454 348 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 PTPAQ15257 358 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 PCBP1Q15365 356 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMAD3-211ENST00000559460 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-211ENST00000559460 SYNE3Q6ZMZ3 975 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 TMTC3Q6ZXV5 915 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 MIER3Q7Z3K6 550 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 CYP2U1Q7Z449 544 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 C11orf74Q86VG3 221 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 CAMKK1Q8N5S9 505 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 ZSCAN18Q8TBC5 510 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-211ENST00000559460 BBC3Q96PG8 261 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-211ENST00000559460 DUSP15Q9H1R2 295 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-211ENST00000559460 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 SLC12A7Q9Y666 1083 aa10.78□□□□□ -0.68
SMAD3-211ENST00000559460 ASH1LQ9NR48 2969 aaKnown RBP10.77□□□□□ -0.68
SMAD3-211ENST00000559460 SPAARA0A1B0GVQ0 90 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 MYBPHLA2RUH7 354 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 CHADO15335 359 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 ADAM12O43184 909 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 KIF4AO95239 1232 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 AKAP5P24588 427 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 HOXA11P31270 313 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-211ENST00000559460 SCAPQ12770 1279 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 LRCH2Q5VUJ6 765 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 RDM1Q8NG50 284 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 TTC8Q8TAM2 541 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 TCEAL4Q96EI5 215 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 CPB2Q96IY4 423 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms