RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 DCLK2Q8N568 766 aa17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 ITFG1Q8TB96 612 aa17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 TNFRSF25Q93038 417 aa17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 DDX23Q9BUQ8 820 aaKnown RBP17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 SNTG2Q9NY99 539 aa17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 ORC3Q9UBD5 711 aaPredicted RBP17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
CDC42BPB-205ENST00000559245 NCOR2Q9Y618 2525 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 ADAM12O43184 909 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 XYLBO75191 536 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 XRCC6P12956 609 aaKnown RBP eCLIP17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 TXKP42681 527 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 PRKCQQ04759 706 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 NAB2Q15742 525 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 MLF2Q15773 248 aaPredicted RBP17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 FAM187BQ17R55 369 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 SLC44A4Q53GD3 710 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 CDCA2Q69YH5 1023 aaPredicted RBP17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 ZBTB8OSQ8IWT0 167 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 SUMF1Q8NBK3 374 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 WASF1Q92558 559 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 BCO2Q9BYV7 579 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 CXCL16Q9H2A7 254 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 FZD8Q9H461 694 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 PDZD7Q9H5P4 517 aa17.97■□□□□ 0.47
CDC42BPB-205ENST00000559245 TTLL13PA6NNM8 815 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 N4BP3O15049 544 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 KINO60870 393 aaKnown RBP17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 RECQL4O94761 1208 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 ELAVL2Q12926 359 aaKnown RBP17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 UBXN2BQ14CS0 331 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 AXDND1Q5T1B0 1012 aaPredicted RBP17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 PDXDC1Q6P996 788 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 SLC7A14Q8TBB6 771 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 KXD1Q9BQD3 176 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 SPATA6Q9NWH7 488 aaPredicted RBP17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 CITO14578 2027 aa17.96■□□□□ 0.47
CDC42BPB-205ENST00000559245 WNT7AO00755 349 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 LAMTOR5O43504 91 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 NEMFO60524 1076 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 POU2F2P09086 479 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 FDPSP14324 419 aaKnown RBP17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 OR1D2P34982 312 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 PFKPQ01813 784 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 RAB33AQ14088 237 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 TMEM132AQ24JP5 1023 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 UVSSAQ2YD98 709 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 ZNF528Q3MIS6 628 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 NOSTRINQ8IVI9 506 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 MCPH1Q8NEM0 835 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 OSBPL6Q9BZF3 934 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 FBXO4Q9UKT5 387 aa17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 MTF2Q9Y483 593 aaPredicted RBP17.95■□□□□ 0.46
CDC42BPB-205ENST00000559245 FAM170BA6NMN3 283 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 SPATA31C1P0DKV0 1188 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 ATP2B1P20020 1258 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 PRPF4BQ13523 1007 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 PABPC1LQ4VXU2 614 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 RSPO2Q6UXX9 243 aaPredicted RBP17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 NPAS3Q8IXF0 933 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 MTMR9Q96QG7 549 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 ADPGKQ9BRR6 497 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 C2orf40Q9H1Z8 148 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 LTB4R2Q9NPC1 389 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 DLL3Q9NYJ7 618 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 DNMT3BQ9UBC3 853 aaKnown RBP17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 USP20Q9Y2K6 914 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 SPTBN2O15020 2390 aa17.94■□□□□ 0.46
CDC42BPB-205ENST00000559245 F5P12259 2224 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 BTBD18B2RXH4 712 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 SPTLC1O15269 473 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 PRKCBP05771 671 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 CD72P21854 359 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 FGFR3P22607 806 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 MAGEA9P43362 315 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 CSTF1Q05048 431 aaKnown RBP17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 MAPK6Q16659 721 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 ING5Q8WYH8 240 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 BSNDQ8WZ55 320 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 BORCS6Q96GS4 357 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 TUFT1Q9NNX1 390 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 MTRRQ9UBK8 725 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 KCNH3Q9ULD8 1083 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 GDAQ9Y2T3 454 aa17.93■□□□□ 0.46
CDC42BPB-205ENST00000559245 TICRRQ7Z2Z1 1910 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 CACNA1BQ00975 2339 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 TMEM189-UBE2V1I3L0A0 370 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 ACKR2O00590 384 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 MED24O75448 989 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 EDN1P05305 212 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 LIG1P18858 919 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 IGFBP6P24592 240 aaPredicted RBP17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 VARS2Q5ST30 1063 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 EEF1DP3Q658K8 133 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 RTL10Q7L3V2 364 aa17.92■□□□□ 0.46
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