RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 STRN3Q13033 797 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 PRPF4BQ13523 1007 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 CATSPER4Q7RTX7 472 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 C7orf61Q8IZ16 206 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 RABGGTAQ92696 567 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 EIF3CQ99613 913 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 NAPGQ99747 312 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 CLIC2O15247 247 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 MGEA5O60502 916 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 TSHZ1Q6ZSZ6 1077 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 STXBP4Q6ZWJ1 553 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 RTN4RL1Q86UN2 441 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 SYCP3Q8IZU3 236 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 CEP63Q96MT8 703 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 TMEM206Q9H813 350 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 PLAGL2Q9UPG8 496 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 CNTNAP2Q9UHC6 1331 aa17.2■□□□□ 0.34
CDC42BPB-204ENST00000559043 A0A1B0GUA9 196 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 PROZP22891 400 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 CEP112Q8N8E3 955 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 CBWD1Q9BRT8 395 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 GBP3Q9H0R5 595 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 PDZD7Q9H5P4 517 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 ARGLU1Q9NWB6 273 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 TRAF3IP3Q9Y228 551 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 UBE4BO95155 1302 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 PDXKO00764 312 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 HNRNPDLO14979 420 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 ERLIN2O94905 339 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 KIF20AO95235 890 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 SYN1P17600 705 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 SCP2P22307 547 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 ATF7IP2Q5U623 682 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 DBF4BQ8NFT6 615 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 BICD1Q96G01 975 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 STYXL1Q9Y6J8 313 aa17.19■□□□□ 0.34
CDC42BPB-204ENST00000559043 GNA14O95837 355 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 CSF2RAP15509 400 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 RAG1P15918 1043 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 LIG4P49917 911 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 AMPD2Q01433 879 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 DSC3Q14574 896 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 PLEKHG4Q58EX7 1191 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 UBXN11Q5T124 520 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 USP38Q8NB14 1042 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 EDEM3Q9BZQ6 932 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 PCIF1Q9H4Z3 704 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 TYW1Q9NV66 732 aaKnown RBP17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 TNFSF13BQ9Y275 285 aa17.18■□□□□ 0.34
CDC42BPB-204ENST00000559043 EPHB6O15197 1021 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 GPR182O15218 404 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 EVI5O60447 810 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 CXCL10P02778 98 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 TUBB4BP68371 445 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 PAK2Q13177 524 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 SEZ6Q53EL9 994 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 MFSD5Q6N075 450 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZBTB33Q86T24 672 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 UBE2Q2Q8WVN8 375 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 DPF3Q92784 378 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 EIF2AQ9BY44 585 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 DMAC2Q9NW81 257 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 GUCA1BQ9UMX6 200 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 EXOC7Q9UPT5 735 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 PIN4Q9Y237 131 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 TANC1Q9C0D5 1861 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 A0A0B4J269 797 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 FAM189A1O60320 539 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 TOM1L1O75674 476 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ABCD1P33897 745 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 WHAMMP3Q1A5X7 153 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 TEX35Q5T0J7 233 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 LINC01599Q8WXQ3 324 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZMYND8Q9ULU4 1186 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-204ENST00000559043 ZSCAN20P17040 1043 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 CASP4P49662 377 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 KCNMA1Q12791 1236 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 PCBP1Q15365 356 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 EDRF1Q3B7T1 1238 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 CCDC122Q5T0U0 273 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 CEP120Q8N960 986 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 EHBP1Q8NDI1 1231 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 BAP1Q92560 729 aa17.16■□□□□ 0.34
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