RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 HAS1Q92839 578 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 LENG9Q96B70 501 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 GPATCH3Q96I76 525 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-207ENST00000558919 MRI1Q9BV20 369 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 ASPSCR1Q9BZE9 553 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 SCAND2PQ9GZW5 306 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-207ENST00000558919 SLC2A4RGQ9NR83 387 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 AJAP1Q9UKB5 411 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-207ENST00000558919 INTUQ9ULD6 942 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 FZD1Q9UP38 647 aa4.95□□□□□ -1.62
VPS13C-207ENST00000558919 GAGE12BA1L429 117 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 AHRRA9YTQ3 701 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 LEFTY2O00292 366 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 WNT10BO00744 389 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 RAP2AP10114 183 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 ZSCAN20P17040 1043 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-207ENST00000558919 ATP5JP18859 108 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 PTPN21Q16825 1174 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 FAM102AQ5T9C2 384 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-207ENST00000558919 SEM1Q6ZVN7 128 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 RHOUQ7L0Q8 258 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 MIGA2Q7L4E1 593 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 PNMA8AQ86V59 439 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-207ENST00000558919 SYNE4Q8N205 404 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 AMER2Q8N7J2 671 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 RNF169Q8NCN4 708 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 FBXO18Q8NFZ0 1043 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 CCHCR1Q8TD31 782 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 STON2Q8WXE9 905 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 HDAC10Q969S8 669 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 TEKT5Q96M29 485 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 PCED1AQ9H1Q7 454 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 LDAHQ9H6V9 325 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 NRDE2Q9H7Z3 1164 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 MMRN2Q9H8L6 949 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 TRPM5Q9NZQ8 1165 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 REXO2Q9Y3B8 237 aaKnown RBP4.94□□□□□ -1.62
VPS13C-207ENST00000558919 CHST2Q9Y4C5 530 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 PNPLA7Q6ZV29 1317 aa4.94□□□□□ -1.62
VPS13C-207ENST00000558919 DRGXA6NNA5 263 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 GPR32O75388 356 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 RPS6KA4O75676 772 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 POMCP01189 267 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 AMY1AP04745 511 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 ADH4P08319 380 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 SPATA31D3P0C874 917 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 FPR1P21462 350 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 NR4A1P22736 598 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 ALDH1A3P47895 512 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 PTTG1IPP53801 180 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 ATP8B2P98198 1209 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 KRTAP1-1Q07627 177 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 MTM1Q13496 603 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 BRDTQ58F21 947 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-207ENST00000558919 EFCAB2Q5VUJ9 269 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 METRNLQ641Q3 311 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 SPATA31D4Q6ZUB0 917 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 MRGPREQ86SM8 312 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 PLXDC1Q8IUK5 500 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 RHOT1Q8IXI2 618 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 DPF2Q92785 391 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 COA7Q96BR5 231 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 SORCS2Q96PQ0 1159 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 ACTL7AQ9Y615 435 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 SHROOM4Q9ULL8 1493 aa4.93□□□□□ -1.62
VPS13C-207ENST00000558919 MYBBP1AQ9BQG0 1328 aaKnown RBP4.93□□□□□ -1.62
VPS13C-207ENST00000558919 RNASET2O00584 256 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 HTRA2O43464 458 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 SGTAO43765 313 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 ITGB1P05556 798 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 LAG3P18627 525 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 DDCP20711 480 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 CCND1P24385 295 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 PCSK1P29120 753 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 CHN2P52757 468 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 ADKP55263 362 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 RNASE9P60153 205 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 RAP2BP61225 183 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 CDC42EP1Q00587 391 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 EXOSC10Q01780 885 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 PPP4R3AQ6IN85 833 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 LRRC55Q6ZSA7 311 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 RPUSD2Q8IZ73 545 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 ZGPATQ8N5A5 531 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 CLIP3Q96DZ5 547 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 MYEOVQ96EZ4 313 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 ZNF768Q9H5H4 540 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 TYW1Q9NV66 732 aaKnown RBP4.92□□□□□ -1.62
VPS13C-207ENST00000558919 SLC23A1Q9UHI7 598 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 IPPQ9Y573 584 aa4.92□□□□□ -1.62
VPS13C-207ENST00000558919 hCG_2014768A0A024R1R8 64 aa4.91□□□□□ -1.62
VPS13C-207ENST00000558919 SLPIP03973 132 aa4.91□□□□□ -1.62
VPS13C-207ENST00000558919 NCLP19338 710 aaKnown RBP4.91□□□□□ -1.62
VPS13C-207ENST00000558919 RECQLP46063 649 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-207ENST00000558919 ANAPC15P60006 121 aa4.91□□□□□ -1.62
VPS13C-207ENST00000558919 CTXN1P60606 82 aa4.91□□□□□ -1.62
VPS13C-207ENST00000558919 KIF23Q02241 960 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms