RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM1-216ENST00000558910 ZNF568Q3ZCX4 644 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 HYIQ5T013 277 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 RRAGBQ5VZM2 374 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 KANK3Q6NY19 840 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 TAS1R3Q7RTX0 852 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 EFHBQ8N7U6 833 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 VN1R2Q8NFZ6 395 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 RAD54LQ92698 747 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 AK8Q96MA6 479 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 ZSCAN16Q9H4T2 348 aaPredicted RBP13.19□□□□□ -0.3
TPM1-216ENST00000558910 BLOC1S4Q9NUP1 217 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 KANSL3Q9P2N6 904 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 CD207Q9UJ71 328 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 GIT1Q9Y2X7 761 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 K7ENM7 598 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 NR1I2O75469 434 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 PLS3P13797 630 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 GUCY2CP25092 1073 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 TXLNAP40222 546 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 SMTNP53814 917 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 STRN3Q13033 797 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 DUSP6Q16828 381 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 FAM187BQ17R55 369 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 COLGALT2Q8IYK4 626 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 C12orf76Q8N812 135 aaPredicted RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 STAMQ92783 540 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 CHAMP1Q96JM3 812 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 ACO2Q99798 780 aaKnown RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 PAAF1Q9BRP4 392 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 MRPL4Q9BYD3 311 aaKnown RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 IL21Q9HBE4 155 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 LZTS1Q9Y250 596 aa13.18□□□□□ -0.3
TPM1-216ENST00000558910 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
TPM1-216ENST00000558910 PHLPP2Q6ZVD8 1323 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 NCK2O43639 380 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 TADA2AO75478 443 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 ZSCAN22P10073 491 aaPredicted RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 NMT1P30419 496 aaKnown RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 COPS2P61201 443 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 CTC1Q2NKJ3 1217 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 ZNF396Q96N95 335 aaPredicted RBP13.17□□□□□ -0.3
TPM1-216ENST00000558910 ZBP1Q9H171 429 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 CDT1Q9H211 546 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
TPM1-216ENST00000558910 SPTLC2O15270 562 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 MBTPS2O43462 519 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 F13A1P00488 732 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 SPATA31D3P0C874 917 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 MAPTP10636 758 aaKnown RBP13.16□□□□□ -0.3
TPM1-216ENST00000558910 IDEP14735 1019 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 EPCAMP16422 314 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 IGFBP6P24592 240 aaPredicted RBP13.16□□□□□ -0.3
TPM1-216ENST00000558910 KLRC2P26717 231 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 STAT6P42226 847 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 SPAG1Q07617 926 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 GIT2Q14161 759 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 DCAF4L1Q3SXM0 396 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 RARS2Q5T160 578 aaKnown RBP13.16□□□□□ -0.3
TPM1-216ENST00000558910 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 SPATA31D4Q6ZUB0 917 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
TPM1-216ENST00000558910 TMEM161BQ8NDZ6 487 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 TMEM175Q9BSA9 504 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 BDP1A6H8Y1 2624 aa13.16□□□□□ -0.3
TPM1-216ENST00000558910 A0A087X0B3 334 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 PTGESO14684 152 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 URODP06132 367 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 THP07101 528 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 CTSAP10619 480 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
TPM1-216ENST00000558910 DDIT3P35638 169 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 LIG4P49917 911 aa13.15□□□□□ -0.3
TPM1-216ENST00000558910 YARSP54577 528 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms